RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 CDY2AQ9Y6F7 541 aa7.1□□□□□ -1.27
RPA3-204ENST00000406109 ANKRD11Q6UB99 2663 aaPredicted RBP7.1□□□□□ -1.27
RPA3-204ENST00000406109 IGSF9BQ9UPX0 1349 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 CNOT1A5YKK6 2376 aaKnown RBP7.09□□□□□ -1.27
RPA3-204ENST00000406109 PNMA6FA0A0J9YX94 578 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 MEIS2O14770 477 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 BRD1O95696 1058 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 SCG2P13521 617 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 RXRAP19793 462 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 RPS6KB1P23443 525 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 MARK3P27448 753 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 MRPS6P82932 125 aaKnown RBP7.09□□□□□ -1.27
RPA3-204ENST00000406109 SP4Q02446 784 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 TMEM62Q0P6H9 643 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 TROAPQ12815 778 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 GNPTABQ3T906 1256 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 PCNX4Q63HM2 1172 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 USP17L6PQ6QN14 398 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 RUFY3Q7L099 469 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 HOMER1Q86YM7 354 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 ZNF687Q8N1G0 1237 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 KREMEN2Q8NCW0 462 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 CTCFLQ8NI51 663 aaPredicted RBP7.09□□□□□ -1.27
RPA3-204ENST00000406109 RASGRP4Q8TDF6 673 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 PIBF1Q8WXW3 757 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 PPP2R3CQ969Q6 453 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 IRF2BPLQ9H1B7 796 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 BRPF3Q9ULD4 1205 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 CYP46A1Q9Y6A2 500 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 SQORQ9Y6N5 450 aa7.09□□□□□ -1.27
RPA3-204ENST00000406109 DMXL2Q8TDJ6 3036 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 LOC400499M0QZD8 3231 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 KLF18A0A0U1RQI7 1052 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 HIDE1A8MVS5 230 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 FGF18O76093 207 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 DDAH1O94760 285 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 CALM1P0DP23 149 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 CALM2P0DP24 149 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 CALM3P0DP25 149 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 INSRRP14616 1297 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 ITGB5P18084 799 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 SP100P23497 879 aaPredicted RBP7.08□□□□□ -1.28
RPA3-204ENST00000406109 KIF5BP33176 963 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 GNAQP50148 359 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 UBE3AQ05086 875 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 APOBRQ0VD83 1088 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 ARSIQ5FYB1 569 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 FAM102BQ5T8I3 360 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 ANKRD54Q6NXT1 300 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 ERMP1Q7Z2K6 904 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 FRMD5Q7Z6J6 570 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 RSPH3Q86UC2 560 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 SGMS1Q86VZ5 419 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 CMTR1Q8N1G2 835 aaKnown RBP7.08□□□□□ -1.28
RPA3-204ENST00000406109 CCDC82Q8N4S0 544 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 FANCBQ8NB91 859 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 SEPT1Q8WYJ6 367 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 BRF1Q92994 677 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 MAP3K14Q99558 947 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 CDCA3Q99618 268 aaPredicted RBP7.08□□□□□ -1.28
RPA3-204ENST00000406109 LZTS2Q9BRK4 669 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 LARP6Q9BRS8 491 aaKnown RBP7.08□□□□□ -1.28
RPA3-204ENST00000406109 FTHL17Q9BXU8 183 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 FAM49AQ9H0Q0 323 aaPredicted RBP7.08□□□□□ -1.28
RPA3-204ENST00000406109 CWH43Q9H720 699 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 CDHR5Q9HBB8 845 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 PDRG1Q9NUG6 133 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 TYW1Q9NV66 732 aaKnown RBP7.08□□□□□ -1.28
RPA3-204ENST00000406109 ERAP1Q9NZ08 941 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 NBEAQ8NFP9 2946 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 ATRXP46100 2492 aa7.08□□□□□ -1.28
RPA3-204ENST00000406109 KDM3AQ9Y4C1 1321 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 C2CD4DB7Z1M9 353 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 PIK3CDO00329 1044 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 ZBTB43O43298 467 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 PLEKHA8P1O95397 391 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 TECP42680 631 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 SARSP49591 514 aaKnown RBP7.07□□□□□ -1.28
RPA3-204ENST00000406109 IGBP1P78318 339 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 TMEM266Q2M3C6 531 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 C8orf34Q49A92 452 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 IER5Q5VY09 327 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 XRRA1Q6P2D8 792 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 LRRC55Q6ZSA7 311 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 MICU3Q86XE3 530 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 SRBD1Q8N5C6 995 aaKnown RBP7.07□□□□□ -1.28
RPA3-204ENST00000406109 COLGALT1Q8NBJ5 622 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 FEZF2Q8TBJ5 459 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 MICAL1Q8TDZ2 1067 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 TRAPPC12Q8WVT3 735 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 TMEM40Q8WWA1 233 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 GPRASP2Q96D09 838 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 RRP36Q96EU6 259 aaKnown RBP7.07□□□□□ -1.28
RPA3-204ENST00000406109 APOL5Q9BWW9 433 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 CELF4Q9BZC1 486 aaKnown RBP7.07□□□□□ -1.28
RPA3-204ENST00000406109 TM6SF1Q9BZW5 370 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 TMEM260Q9NX78 707 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 PCDHB12Q9Y5F1 795 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 PCDHA2Q9Y5H9 948 aa7.07□□□□□ -1.28
RPA3-204ENST00000406109 TRPV2Q9Y5S1 764 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms