RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 OR2W6PQ8NHA6 318 aa6.58□□□□□ -1.36
HMGB1P13-201ENST00000406019 WNK4Q96J92 1243 aa6.58□□□□□ -1.36
HMGB1P13-201ENST00000406019 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
HMGB1P13-201ENST00000406019 B4GALT6Q9UBX8 382 aa6.58□□□□□ -1.36
HMGB1P13-201ENST00000406019 FTSJ1Q9UET6 329 aa6.58□□□□□ -1.36
HMGB1P13-201ENST00000406019 TTBK1Q5TCY1 1321 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 SHTN1A0MZ66 631 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 FOXP2O15409 715 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 MAFO75444 373 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 FBXO21O94952 628 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 PLATP00750 562 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 ITGB3P05106 788 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 SYN1P17600 705 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 RAB27AP51159 221 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 LRRC41Q15345 812 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 ARHGAP44Q17R89 818 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 PIK3R6Q5UE93 754 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 REXO1L1PQ8IX06 675 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 CCDC146Q8IYE0 955 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 LGI4Q8N135 537 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 USP7Q93009 1102 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 CCDC136Q96JN2 1154 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 BTBD2Q9BX70 525 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 CCDC8Q9H0W5 538 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 ARHGAP28Q9P2N2 729 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 ASB1Q9Y576 335 aa6.57□□□□□ -1.36
HMGB1P13-201ENST00000406019 H0Y858 1186 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 GOLGA6L22H0YM25 854 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 PRRG2O14669 202 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 KIF3BO15066 747 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 AKAP10O43572 662 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 SCGB1D2O95969 90 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 F2P00734 622 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 CYP1A1P04798 512 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 ID4P47928 161 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 EPHB4P54760 987 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 DSG1Q02413 1049 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 ITKQ08881 620 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 EFEMP1Q12805 493 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 UBXN11Q5T124 520 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 CERS3Q8IU89 383 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 KBTBD2Q8IY47 623 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 GBP4Q96PP9 640 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 MEGF9Q9H1U4 602 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 CNOT11Q9UKZ1 510 aaKnown RBP6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 APOBEC2Q9Y235 224 aaKnown RBP6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 PTPN22Q9Y2R2 807 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 RIPOR2Q9Y4F9 1068 aa6.56□□□□□ -1.36
HMGB1P13-201ENST00000406019 PTPDC1A2A3K4 754 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 PLEKHD1A6NEE1 506 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 K7ESF4 209 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 GABRDO14764 452 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 CNOT4O95628 575 aaKnown RBP6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 POLD1P28340 1107 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 ECE1P42892 770 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 FNTBP49356 437 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 SCNN1BP51168 640 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 ZNF827Q17R98 1081 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 BORAQ6PGQ7 559 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 CXXC5Q7LFL8 322 aaKnown RBP6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 BCL6BQ8N143 479 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 CNTD1Q8N815 330 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 CHMP4CQ96CF2 233 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 MTMR8Q96EF0 704 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 C16orf92Q96LL3 132 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 CAMKK2Q96RR4 588 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 BDH2Q9BUT1 245 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 PCGF6Q9BYE7 350 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 KRTAP3-1Q9BYR8 98 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 CDH19Q9H159 772 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 UCKL1Q9NWZ5 548 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 PPP4R1LQ9P1A2 415 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 SPEF1Q9Y4P9 236 aa6.55□□□□□ -1.36
HMGB1P13-201ENST00000406019 E2F8A0AVK6 867 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 B8ZZF3 427 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 ZNF888P0CJ79 500 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 GNALP38405 381 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 BUD31P41223 144 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 ETV4P43268 484 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 TMPRSS15P98073 1019 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 PIN1Q13526 163 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 SYDE2Q5VT97 1194 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 TMEM200BQ69YZ2 307 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 CCSAPQ6IQ19 270 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 EP400NLQ6ZTU2 488 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 FAM124AQ86V42 546 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 WDR75Q8IWA0 830 aaKnown RBP6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 CCAR1Q8IX12 1150 aaKnown RBP6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 SMC1BQ8NDV3 1235 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 COG1Q8WTW3 980 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 MENTQ9BUN1 341 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 ZDHHC5Q9C0B5 715 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 OR10A5Q9H207 317 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 BARX1Q9HBU1 254 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 ZIM2Q9NZV7 527 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 TRHDEQ9UKU6 1024 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 SLC4A7Q9Y6M7 1214 aa6.54□□□□□ -1.36
HMGB1P13-201ENST00000406019 PRAMEF22A3QJZ6 481 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms