RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 MTHFD1LQ6UB35 978 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 C1orf186Q6ZWK4 172 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 MAEAQ7L5Y9 396 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 DYMQ7RTS9 669 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 NECAB2Q7Z6G3 386 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 SESTD1Q86VW0 696 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 GRAMD1CQ8IYS0 662 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 METTL13Q8N6R0 699 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 TCP11Q8WWU5 503 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 DDX12PQ92771 950 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 RUSC1Q9BVN2 902 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 NUP62CLQ9H1M0 184 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 C11orf49Q9H6J7 331 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 DHX33Q9H6R0 707 aaKnown RBP17.48■□□□□ 0.39
CDPF1-204ENST00000404744 GTF2IRD1Q9UHL9 959 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 TUBE1Q9UJT0 475 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 LOXHD1Q8IVV2 1947 aa17.48■□□□□ 0.39
CDPF1-204ENST00000404744 MYMKA6NI61 221 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 ZBTB42B2RXF5 422 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 GTPBP6O43824 516 aaPredicted RBP17.47■□□□□ 0.39
CDPF1-204ENST00000404744 TRAK2O60296 914 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 ASIC1P78348 528 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 RAD51AP2Q09MP3 1159 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 EMC2Q15006 297 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 POSTNQ15063 836 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 CAMK4Q16566 473 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 KLHL40Q2TBA0 621 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 FAM102BQ5T8I3 360 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 EFCAB12Q6NXP0 572 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 ELOA2Q8IYF1 753 aaPredicted RBP17.47■□□□□ 0.39
CDPF1-204ENST00000404744 CCDC47Q96A33 483 aaKnown RBP17.47■□□□□ 0.39
CDPF1-204ENST00000404744 PAWRQ96IZ0 340 aaKnown RBP17.47■□□□□ 0.39
CDPF1-204ENST00000404744 C7orf25Q9BPX7 421 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 CLSTN2Q9H4D0 955 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 CENPFP49454 3210 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 GRIN2DO15399 1336 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 TBCAO75347 108 aaKnown RBP17.47■□□□□ 0.39
CDPF1-204ENST00000404744 C22orf31O95567 290 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 IDEP14735 1019 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 EN2P19622 333 aaPredicted RBP17.47■□□□□ 0.39
CDPF1-204ENST00000404744 GUCY2CP25092 1073 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 ATN1P54259 1190 aaPredicted RBP17.47■□□□□ 0.39
CDPF1-204ENST00000404744 ARSHQ5FYA8 562 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 GDF6Q6KF10 455 aaPredicted RBP17.47■□□□□ 0.39
CDPF1-204ENST00000404744 SH3RF1Q7Z6J0 888 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 DIS3LQ8TF46 1054 aaKnown RBP17.47■□□□□ 0.39
CDPF1-204ENST00000404744 DRC1Q96MC2 740 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 CEP89Q96ST8 783 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 TRIM9Q9C026 710 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 BLZF1Q9H2G9 400 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 ZHX3Q9H4I2 956 aa17.47■□□□□ 0.39
CDPF1-204ENST00000404744 MROH7Q68CQ1 1323 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 NPHP3-ACAD11A0A0J9YXS1 232 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 TREHO43280 583 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 FAM13AO94988 1023 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 SMC2O95347 1197 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 CYP2C9P11712 490 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 MNX1P50219 401 aaPredicted RBP17.46■□□□□ 0.39
CDPF1-204ENST00000404744 CUL4BQ13620 913 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 PTGISQ16647 500 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 MARCH8Q5T0T0 291 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 IER5Q5VY09 327 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 SLC39A5Q6ZMH5 540 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 CCDC65Q8IXS2 484 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 LRRC71Q8N4P6 559 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 SLC43A3Q8NBI5 491 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 KIFAP3Q92845 792 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 MAP7D2Q96T17 732 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 ODF2LQ9ULJ1 636 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 PCDHA2Q9Y5H9 948 aa17.46■□□□□ 0.39
CDPF1-204ENST00000404744 SCN10AQ9Y5Y9 1956 aa17.46■□□□□ 0.38
CDPF1-204ENST00000404744 MBLAC1A4D2B0 266 aaPredicted RBP17.45■□□□□ 0.38
CDPF1-204ENST00000404744 TLR3O15455 904 aaKnown RBP17.45■□□□□ 0.38
CDPF1-204ENST00000404744 HIP1RO75146 1068 aa17.45■□□□□ 0.38
CDPF1-204ENST00000404744 COL6A1P12109 1028 aa17.45■□□□□ 0.38
CDPF1-204ENST00000404744 ZNF200P98182 395 aaPredicted RBP17.45■□□□□ 0.38
CDPF1-204ENST00000404744 CACNB1Q02641 598 aaPredicted RBP17.45■□□□□ 0.38
CDPF1-204ENST00000404744 PNOCQ13519 176 aa17.45■□□□□ 0.38
CDPF1-204ENST00000404744 GIT2Q14161 759 aa17.45■□□□□ 0.38
CDPF1-204ENST00000404744 CCDC183Q5T5S1 534 aa17.45■□□□□ 0.38
CDPF1-204ENST00000404744 CAVIN1Q6NZI2 390 aaKnown RBP17.45■□□□□ 0.38
CDPF1-204ENST00000404744 TMEM143Q96AN5 459 aa17.45■□□□□ 0.38
CDPF1-204ENST00000404744 REEP2Q9BRK0 252 aa17.45■□□□□ 0.38
CDPF1-204ENST00000404744 PDLIM7Q9NR12 457 aa17.45■□□□□ 0.38
CDPF1-204ENST00000404744 IGKV6-21A0A0C4DH24 114 aa17.44■□□□□ 0.38
CDPF1-204ENST00000404744 SMIM35A0A1B0GVV1 85 aa17.44■□□□□ 0.38
CDPF1-204ENST00000404744 PRR29P0C7W0 189 aa17.44■□□□□ 0.38
CDPF1-204ENST00000404744 CASP1P29466 404 aa17.44■□□□□ 0.38
CDPF1-204ENST00000404744 HOXC8P31273 242 aa17.44■□□□□ 0.38
CDPF1-204ENST00000404744 ADAM17P78536 824 aa17.44■□□□□ 0.38
CDPF1-204ENST00000404744 MDM2Q00987 491 aaPredicted RBP17.44■□□□□ 0.38
CDPF1-204ENST00000404744 TAF2Q6P1X5 1199 aa17.44■□□□□ 0.38
CDPF1-204ENST00000404744 RSPH3Q86UC2 560 aa17.44■□□□□ 0.38
CDPF1-204ENST00000404744 PSPC1Q8WXF1 523 aaKnown RBP17.44■□□□□ 0.38
CDPF1-204ENST00000404744 SMARCE1Q969G3 411 aa17.44■□□□□ 0.38
CDPF1-204ENST00000404744 ZBTB10Q96DT7 871 aa17.44■□□□□ 0.38
CDPF1-204ENST00000404744 IFT74Q96LB3 600 aa17.44■□□□□ 0.38
CDPF1-204ENST00000404744 POLR3FQ9H1D9 316 aaPredicted RBP17.44■□□□□ 0.38
CDPF1-204ENST00000404744 POLD4Q9HCU8 107 aa17.44■□□□□ 0.38
CDPF1-204ENST00000404744 XPNPEP1Q9NQW7 623 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms