RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 MTRQ99707 1265 aa37.03■■■■□ 3.52
CSNK1E-204ENST00000403904 DHX33Q9H6R0 707 aaKnown RBP37.03■■■■□ 3.52
CSNK1E-204ENST00000403904 PPME1Q9Y570 386 aa37.03■■■■□ 3.52
CSNK1E-204ENST00000403904 MAFO75444 373 aaPredicted RBP37.02■■■■□ 3.52
CSNK1E-204ENST00000403904 SLC7A3Q8WY07 619 aa37.02■■■■□ 3.52
CSNK1E-204ENST00000403904 DGAT1O75907 488 aa37.01■■■■□ 3.52
CSNK1E-204ENST00000403904 CYP11B2P19099 503 aa37.01■■■■□ 3.52
CSNK1E-204ENST00000403904 RFC5P40937 340 aa37.01■■■■□ 3.52
CSNK1E-204ENST00000403904 ARSHQ5FYA8 562 aa37.01■■■■□ 3.52
CSNK1E-204ENST00000403904 C1orf186Q6ZWK4 172 aa37.01■■■■□ 3.52
CSNK1E-204ENST00000403904 UBE2Q1Q7Z7E8 422 aa37.01■■■■□ 3.52
CSNK1E-204ENST00000403904 GRAMD1CQ8IYS0 662 aa37.01■■■■□ 3.52
CSNK1E-204ENST00000403904 MAGEF1Q9HAY2 307 aa37.01■■■■□ 3.52
CSNK1E-204ENST00000403904 TRMT13Q9NUP7 481 aaKnown RBP37.01■■■■□ 3.52
CSNK1E-204ENST00000403904 MBLAC1A4D2B0 266 aaPredicted RBP37■■■■□ 3.51
CSNK1E-204ENST00000403904 KINO60870 393 aaKnown RBP37■■■■□ 3.51
CSNK1E-204ENST00000403904 AFMP43652 599 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 RAD51AP2Q09MP3 1159 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 EMC2Q15006 297 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 MAEAQ7L5Y9 396 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 SEZ6LQ9BYH1 1024 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 TNMDQ9H2S6 317 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 SUGCTQ9HAC7 445 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 PDLIM7Q9NR12 457 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 MAGEB2O15479 319 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 PTGISQ16647 500 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 LRRC71Q8N4P6 559 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 METTL13Q8N6R0 699 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 PAGE5Q96GU1 130 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 TRPV6Q9H1D0 765 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 ATP6V0A4Q9HBG4 840 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 XPNPEP1Q9NQW7 623 aa37■■■■□ 3.51
CSNK1E-204ENST00000403904 NPHP3-ACAD11A0A0J9YXS1 232 aa36.99■■■■□ 3.51
CSNK1E-204ENST00000403904 MYMKA6NI61 221 aa36.99■■■■□ 3.51
CSNK1E-204ENST00000403904 EFCAB12Q6NXP0 572 aa36.99■■■■□ 3.51
CSNK1E-204ENST00000403904 TIGD1Q96MW7 591 aa36.99■■■■□ 3.51
CSNK1E-204ENST00000403904 POLD4Q9HCU8 107 aa36.99■■■■□ 3.51
CSNK1E-204ENST00000403904 IGKV6-21A0A0C4DH24 114 aa36.98■■■■□ 3.51
CSNK1E-204ENST00000403904 NFKBIBQ15653 356 aa36.98■■■■□ 3.51
CSNK1E-204ENST00000403904 CTAGE1Q96RT6 745 aa36.98■■■■□ 3.51
CSNK1E-204ENST00000403904 B4GALT4O60513 344 aa36.97■■■■□ 3.51
CSNK1E-204ENST00000403904 SNX17Q15036 470 aa36.97■■■■□ 3.51
CSNK1E-204ENST00000403904 RUFY4Q6ZNE9 571 aa36.97■■■■□ 3.51
CSNK1E-204ENST00000403904 DYMQ7RTS9 669 aa36.97■■■■□ 3.51
CSNK1E-204ENST00000403904 EXOC8Q8IYI6 725 aa36.97■■■■□ 3.51
CSNK1E-204ENST00000403904 RETREG2Q8NC44 543 aa36.97■■■■□ 3.51
CSNK1E-204ENST00000403904 PCDHA2Q9Y5H9 948 aa36.97■■■■□ 3.51
CSNK1E-204ENST00000403904 CYP2C9P11712 490 aa36.96■■■■□ 3.51
CSNK1E-204ENST00000403904 CASP1P29466 404 aa36.96■■■■□ 3.51
CSNK1E-204ENST00000403904 AMPD3Q01432 767 aa36.96■■■■□ 3.51
CSNK1E-204ENST00000403904 DRP2Q13474 957 aa36.96■■■■□ 3.51
CSNK1E-204ENST00000403904 C1orf53Q5VUE5 145 aa36.96■■■■□ 3.51
CSNK1E-204ENST00000403904 SH3RF1Q7Z6J0 888 aa36.96■■■■□ 3.51
CSNK1E-204ENST00000403904 DDX12PQ92771 950 aa36.96■■■■□ 3.51
CSNK1E-204ENST00000403904 TMEM143Q96AN5 459 aa36.96■■■■□ 3.51
CSNK1E-204ENST00000403904 JPH2Q9BR39 696 aaPredicted RBP36.96■■■■□ 3.51
CSNK1E-204ENST00000403904 KCND2Q9NZV8 630 aa36.96■■■■□ 3.51
CSNK1E-204ENST00000403904 NOD1Q9Y239 953 aa36.96■■■■□ 3.51
CSNK1E-204ENST00000403904 PQBP1O60828 265 aaKnown RBP36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 MBD3O95983 291 aa36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 KRT18P05783 430 aaKnown RBP36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 CLCN3P51790 818 aa36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 CACNB1Q02641 598 aaPredicted RBP36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 MKRN4PQ13434 485 aaPredicted RBP36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 LRRC26Q2I0M4 334 aa36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 TRIM60Q495X7 471 aa36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 FAM126BQ8IXS8 530 aa36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 MCPH1Q8NEM0 835 aa36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 GPRC5CQ9NQ84 441 aa36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 FAM102BQ5T8I3 360 aa36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 KANK3Q6NY19 840 aa36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 BLZF1Q9H2G9 400 aa36.95■■■■□ 3.51
CSNK1E-204ENST00000403904 MROH7Q68CQ1 1323 aa36.94■■■■□ 3.5
CSNK1E-204ENST00000403904 PTMSP20962 102 aa36.94■■■■□ 3.5
CSNK1E-204ENST00000403904 GUCY2CP25092 1073 aa36.94■■■■□ 3.5
CSNK1E-204ENST00000403904 SERINC5Q86VE9 423 aa36.94■■■■□ 3.5
CSNK1E-204ENST00000403904 LINC01465Q8N7H1 131 aa36.94■■■■□ 3.5
CSNK1E-204ENST00000403904 REEP2Q9BRK0 252 aa36.94■■■■□ 3.5
CSNK1E-204ENST00000403904 TRIM9Q9C026 710 aa36.94■■■■□ 3.5
CSNK1E-204ENST00000403904 LRRC27Q9C0I9 530 aa36.94■■■■□ 3.5
CSNK1E-204ENST00000403904 FAM49AQ9H0Q0 323 aaPredicted RBP36.94■■■■□ 3.5
CSNK1E-204ENST00000403904 GIT2Q14161 759 aa36.93■■■■□ 3.5
CSNK1E-204ENST00000403904 ANKRD33Q7Z3H0 272 aa36.93■■■■□ 3.5
CSNK1E-204ENST00000403904 ATP11BQ9Y2G3 1177 aa36.93■■■■□ 3.5
CSNK1E-204ENST00000403904 SMIM35A0A1B0GVV1 85 aa36.92■■■■□ 3.5
CSNK1E-204ENST00000403904 HIP1RO75146 1068 aa36.92■■■■□ 3.5
CSNK1E-204ENST00000403904 TMOD1P28289 359 aa36.92■■■■□ 3.5
CSNK1E-204ENST00000403904 RTP1P59025 263 aa36.92■■■■□ 3.5
CSNK1E-204ENST00000403904 TLE2Q04725 743 aa36.92■■■■□ 3.5
CSNK1E-204ENST00000403904 CUL4BQ13620 913 aa36.92■■■■□ 3.5
CSNK1E-204ENST00000403904 KIAA0319LQ8IZA0 1049 aa36.92■■■■□ 3.5
CSNK1E-204ENST00000403904 DNAJC19Q96DA6 116 aa36.92■■■■□ 3.5
CSNK1E-204ENST00000403904 CCDC34Q96HJ3 373 aa36.92■■■■□ 3.5
CSNK1E-204ENST00000403904 C7orf25Q9BPX7 421 aa36.92■■■■□ 3.5
CSNK1E-204ENST00000403904 RSPH10B2B2RC85 870 aa36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 GAS2O43903 313 aaKnown RBP36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 CD4P01730 458 aa36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 PRR29P0C7W0 189 aa36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 RSPH10BP0C881 870 aa36.91■■■■□ 3.5
CSNK1E-204ENST00000403904 DNM2P50570 870 aa36.91■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms