RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 CHRDL2Q6WN34 429 aa15.28■□□□□ 0.04
VPREB1-202ENST00000403807 DEFB128Q7Z7B8 93 aa15.28■□□□□ 0.04
VPREB1-202ENST00000403807 CABP7Q86V35 215 aa15.28■□□□□ 0.04
VPREB1-202ENST00000403807 LRRC71Q8N4P6 559 aa15.28■□□□□ 0.04
VPREB1-202ENST00000403807 ZNF579Q8NAF0 562 aaKnown RBP15.28■□□□□ 0.04
VPREB1-202ENST00000403807 CALML4Q96GE6 196 aa15.28■□□□□ 0.04
VPREB1-202ENST00000403807 CDK5RAP3Q96JB5 506 aa15.28■□□□□ 0.04
VPREB1-202ENST00000403807 MMTAG2Q9BU76 263 aaKnown RBP15.28■□□□□ 0.04
VPREB1-202ENST00000403807 CSRNP2Q9H175 543 aa15.28■□□□□ 0.04
VPREB1-202ENST00000403807 DHX33Q9H6R0 707 aaKnown RBP15.28■□□□□ 0.04
VPREB1-202ENST00000403807 AKT3Q9Y243 479 aa15.28■□□□□ 0.04
VPREB1-202ENST00000403807 RBM19Q9Y4C8 960 aaKnown RBP15.28■□□□□ 0.04
VPREB1-202ENST00000403807 TRIP12Q14669 1992 aaPredicted RBP15.27■□□□□ 0.04
VPREB1-202ENST00000403807 GAS2O43903 313 aaKnown RBP15.27■□□□□ 0.04
VPREB1-202ENST00000403807 DGAT1O75907 488 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 FGBP02675 491 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 CHRNA1P02708 482 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 ACRP10323 421 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 NCLP19338 710 aaKnown RBP15.27■□□□□ 0.04
VPREB1-202ENST00000403807 CLCN3P51790 818 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 KRT85P78386 507 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 GRIN1Q05586 938 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 TMEM62Q0P6H9 643 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 ECM1Q16610 540 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 HYIQ5T013 277 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 TRAF7Q6Q0C0 670 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 LINC01465Q8N7H1 131 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 KCNG4Q8TDN1 519 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 TCP11Q8WWU5 503 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 CLIC6Q96NY7 704 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 CELF4Q9BZC1 486 aaKnown RBP15.27■□□□□ 0.04
VPREB1-202ENST00000403807 CIZ1Q9ULV3 898 aaPredicted RBP15.27■□□□□ 0.04
VPREB1-202ENST00000403807 TRPV2Q9Y5S1 764 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 CDY2AQ9Y6F7 541 aa15.27■□□□□ 0.04
VPREB1-202ENST00000403807 ARHGEF35A5YM69 484 aa15.26■□□□□ 0.03
VPREB1-202ENST00000403807 TXLNAP40222 546 aa15.26■□□□□ 0.03
VPREB1-202ENST00000403807 MGAT3Q09327 533 aa15.26■□□□□ 0.03
VPREB1-202ENST00000403807 PSRC1Q6PGN9 363 aaPredicted RBP15.26■□□□□ 0.03
VPREB1-202ENST00000403807 C16orf59Q7L2K0 433 aa15.26■□□□□ 0.03
VPREB1-202ENST00000403807 RASSF8Q8NHQ8 419 aa15.26■□□□□ 0.03
VPREB1-202ENST00000403807 MTRQ99707 1265 aa15.26■□□□□ 0.03
VPREB1-202ENST00000403807 CCSER1Q9C0I3 900 aa15.26■□□□□ 0.03
VPREB1-202ENST00000403807 TSHZ2Q9NRE2 1034 aa15.26■□□□□ 0.03
VPREB1-202ENST00000403807 SUCLA2Q9P2R7 463 aaPredicted RBP15.26■□□□□ 0.03
VPREB1-202ENST00000403807 CCDC39Q9UFE4 941 aa15.26■□□□□ 0.03
VPREB1-202ENST00000403807 RCOR1Q9UKL0 485 aa15.26■□□□□ 0.03
VPREB1-202ENST00000403807 E9PMD0 336 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 ASAP2O43150 1006 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 CUTAO60888 179 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 NBNO60934 754 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 EYA4O95677 639 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 CXCL10P02778 98 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 VTNP04004 478 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 ACTN1P12814 892 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 EPHB4P54760 987 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 NLRP11P59045 1033 aaKnown RBP15.25■□□□□ 0.03
VPREB1-202ENST00000403807 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
VPREB1-202ENST00000403807 GPNMBQ14956 572 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 EMC2Q15006 297 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 SPECC1Q5M775 1068 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 TMEM240Q5SV17 173 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 PADI6Q6TGC4 694 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 ZNF365Q70YC5 407 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 USP38Q8NB14 1042 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 EPSTI1Q96J88 318 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 PNMA5Q96PV4 448 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 PLIN2Q99541 437 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 BHMT2Q9H2M3 363 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 ATP6V0A4Q9HBG4 840 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 GINS2Q9Y248 185 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 SQORQ9Y6N5 450 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 WDR81Q562E7 1941 aa15.25■□□□□ 0.03
VPREB1-202ENST00000403807 GPR32O75388 356 aa15.24■□□□□ 0.03
VPREB1-202ENST00000403807 ME1P48163 572 aa15.24■□□□□ 0.03
VPREB1-202ENST00000403807 FXR1P51114 621 aaKnown RBP eCLIP15.24■□□□□ 0.03
VPREB1-202ENST00000403807 CRYBB1P53674 252 aaPredicted RBP15.24■□□□□ 0.03
VPREB1-202ENST00000403807 GRB10Q13322 594 aa15.24■□□□□ 0.03
VPREB1-202ENST00000403807 MBTPS1Q14703 1052 aa15.24■□□□□ 0.03
VPREB1-202ENST00000403807 TMEM119Q4V9L6 283 aa15.24■□□□□ 0.03
VPREB1-202ENST00000403807 RHPN2Q8IUC4 686 aa15.24■□□□□ 0.03
VPREB1-202ENST00000403807 MCPH1Q8NEM0 835 aa15.24■□□□□ 0.03
VPREB1-202ENST00000403807 PSPC1Q8WXF1 523 aaKnown RBP15.24■□□□□ 0.03
VPREB1-202ENST00000403807 SYMPKQ92797 1274 aaKnown RBP15.24■□□□□ 0.03
VPREB1-202ENST00000403807 TMEM143Q96AN5 459 aa15.24■□□□□ 0.03
VPREB1-202ENST00000403807 SPATA32Q96LK8 384 aa15.24■□□□□ 0.03
VPREB1-202ENST00000403807 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.24■□□□□ 0.03
VPREB1-202ENST00000403807 SCAND2PQ9GZW5 306 aaPredicted RBP15.24■□□□□ 0.03
VPREB1-202ENST00000403807 MTIF3Q9H2K0 278 aaKnown RBP15.24■□□□□ 0.03
VPREB1-202ENST00000403807 PRO3102Q9H379 93 aa15.24■□□□□ 0.03
VPREB1-202ENST00000403807 BMP2KQ9NSY1 1161 aaPredicted RBP15.24■□□□□ 0.03
VPREB1-202ENST00000403807 A0A1W2PPC1 479 aa15.23■□□□□ 0.03
VPREB1-202ENST00000403807 USO1O60763 962 aaKnown RBP15.23■□□□□ 0.03
VPREB1-202ENST00000403807 GHRP10912 638 aa15.23■□□□□ 0.03
VPREB1-202ENST00000403807 CYP11B2P19099 503 aa15.23■□□□□ 0.03
VPREB1-202ENST00000403807 GPC3P51654 580 aa15.23■□□□□ 0.03
VPREB1-202ENST00000403807 DRP2Q13474 957 aa15.23■□□□□ 0.03
VPREB1-202ENST00000403807 MXD4Q14582 209 aaPredicted RBP15.23■□□□□ 0.03
VPREB1-202ENST00000403807 KARSQ15046 597 aaKnown RBP15.23■□□□□ 0.03
VPREB1-202ENST00000403807 SHHQ15465 462 aa15.23■□□□□ 0.03
VPREB1-202ENST00000403807 KIZQ2M2Z5 673 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms