RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 CBWD6Q4V339 395 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 CBWD3Q5JTY5 395 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 CBWD5Q5RIA9 395 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 ETNPPLQ8TBG4 499 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 TBC1D22AQ8WUA7 517 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 CYFIP2Q96F07 1278 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 CCDC113Q9H0I3 377 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 PCIF1Q9H4Z3 704 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 TMEM59LQ9UK28 342 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 SNX24Q9Y343 169 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 HMGB1P1B2RPK0 211 aaPredicted RBP13.03□□□□□ -0.32
RBM39-206ENST00000403542 CALUO43852 315 aaPredicted RBP13.03□□□□□ -0.32
RBM39-206ENST00000403542 DRAP1Q14919 205 aaPredicted RBP13.03□□□□□ -0.32
RBM39-206ENST00000403542 ZYXQ15942 572 aaKnown RBP13.03□□□□□ -0.32
RBM39-206ENST00000403542 EDRF1Q3B7T1 1238 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 CERKLQ49MI3 558 aaPredicted RBP13.03□□□□□ -0.32
RBM39-206ENST00000403542 VPS36Q86VN1 386 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 FAM186BQ8IYM0 893 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 JPH2Q9BR39 696 aaPredicted RBP13.03□□□□□ -0.32
RBM39-206ENST00000403542 THAP2Q9H0W7 228 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 RABGAP1Q9Y3P9 1069 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 H0YGN5 161 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 ATMINO43313 823 aaPredicted RBP13.03□□□□□ -0.32
RBM39-206ENST00000403542 FAM13AO94988 1023 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 NOVP48745 357 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 FRMD5Q7Z6J6 570 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 NT5DC3Q86UY8 548 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 CPNE8Q86YQ8 564 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 BANK1Q8NDB2 785 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 RUBCNQ92622 972 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 FAM163AQ96GL9 167 aaPredicted RBP13.03□□□□□ -0.32
RBM39-206ENST00000403542 EIF2AK1Q9BQI3 630 aaKnown RBP13.03□□□□□ -0.32
RBM39-206ENST00000403542 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.03□□□□□ -0.32
RBM39-206ENST00000403542 DNAJC12Q9UKB3 198 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 PNMA2Q9UL42 364 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 NFS1Q9Y697 457 aa13.03□□□□□ -0.32
RBM39-206ENST00000403542 F5H6K3 240 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 TGFB1I1O43294 461 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 GYS1P13807 737 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 STAT1P42224 750 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 MARCKSL1P49006 195 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 MARSP56192 900 aaKnown RBP13.02□□□□□ -0.33
RBM39-206ENST00000403542 KLRC3Q07444 240 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 ACTN3Q08043 901 aaPredicted RBP13.02□□□□□ -0.33
RBM39-206ENST00000403542 DCAF12L1Q5VU92 463 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 SYT2Q8N9I0 419 aaPredicted RBP13.02□□□□□ -0.33
RBM39-206ENST00000403542 ERMNQ8TAM6 284 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 LENG9Q96B70 501 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 HOOK2Q96ED9 719 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 SELENOSQ9BQE4 189 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 PLCB1Q9NQ66 1216 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 AMFRQ9UKV5 643 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 PTPN22Q9Y2R2 807 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 SMCHD1A6NHR9 2005 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 GOLGA6L7A0A1B0GV03 622 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 HGSO14964 777 aaPredicted RBP13.02□□□□□ -0.33
RBM39-206ENST00000403542 RPA1P27694 616 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 ICA1Q05084 483 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 HYIQ5T013 277 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 APOBEC3HQ6NTF7 200 aaKnown RBP13.02□□□□□ -0.33
RBM39-206ENST00000403542 CCDC174Q6PII3 467 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 SLFN12Q8IYM2 578 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 MREGQ8N565 214 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 SLC20A1Q8WUM9 679 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 DYDC2Q96IM9 177 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 PBKQ96KB5 322 aa13.02□□□□□ -0.33
RBM39-206ENST00000403542 DDX20Q9UHI6 824 aaKnown RBP13.02□□□□□ -0.33
RBM39-206ENST00000403542 UTP11Q9Y3A2 253 aaKnown RBP13.02□□□□□ -0.33
RBM39-206ENST00000403542 CAND2O75155 1236 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 FAM107AO95990 144 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 CPP00450 1065 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 JAG1P78504 1218 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 DDR1Q08345 913 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 CCDC13Q8IYE1 715 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 ACTRT1Q8TDG2 376 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 LRRC45Q96CN5 670 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 CABS1Q96KC9 395 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 GGT7Q9UJ14 662 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 ZBTB21Q9ULJ3 1066 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 TRAF3IP3Q9Y228 551 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 GUCY2CP25092 1073 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 IFNAR2P48551 515 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 IFI16Q16666 785 aaKnown RBP13.01□□□□□ -0.33
RBM39-206ENST00000403542 CCDC38Q502W7 563 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 RINT1Q6NUQ1 792 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 PPP1R18Q6NYC8 613 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 TMC3Q7Z5M5 1100 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 CPLX4Q7Z7G2 160 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 CCDC25Q86WR0 208 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 FBXO11Q86XK2 927 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 CTNNBL1Q8WYA6 563 aaPredicted RBP13.01□□□□□ -0.33
RBM39-206ENST00000403542 RAPGEF5Q92565 580 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 ALG3Q92685 438 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 C18orf8Q96DM3 657 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 BTBD6Q96KE9 485 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 CCDC114Q96M63 670 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 TYW1Q9NV66 732 aaKnown RBP13.01□□□□□ -0.33
RBM39-206ENST00000403542 MAST2Q6P0Q8 1798 aa13.01□□□□□ -0.33
RBM39-206ENST00000403542 SBF2Q86WG5 1849 aa13□□□□□ -0.33
RBM39-206ENST00000403542 COL5A3P25940 1745 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms