RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 MAP4K4O95819 1239 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 IL18BPO95998 194 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 MYBP10242 640 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 LIMS1P48059 325 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 FXR1P51114 621 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 CDR1P51861 262 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 EPHB3P54753 998 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 LGALS4P56470 323 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 TBX4P57082 545 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 NKX3-2P78367 333 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 RTP5Q14D33 572 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 FAM102BQ5T8I3 360 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 EFCAB2Q5VUJ9 269 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 KIAA1841Q6NSI8 718 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 TIGD7Q6NT04 549 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 NME9Q86XW9 330 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 IRF2BP1Q8IU81 584 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 LYSMD2Q8IV50 215 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 C8orf48Q96LL4 319 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 ACAP3Q96P50 834 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 ORAI2Q96SN7 254 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 ZNF552Q9H707 407 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 CNTD2Q9H8S5 307 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 ANLNQ9NQW6 1124 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 GPR45Q9Y5Y3 372 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 MRFAP1Q9Y605 127 aa5.13□□□□□ -1.59
HMGB1P17-201ENST00000403495 E2F8A0AVK6 867 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 ENO2P09104 434 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 AGXTP21549 392 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 ECE1P42892 770 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 MTNR1BP49286 362 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 IL13RA1P78552 427 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 ROM1Q03395 351 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 CACNB2Q08289 660 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 TMEM62Q0P6H9 643 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 KCNK18Q7Z418 384 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 CATIPQ7Z7H3 387 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 LDHDQ86WU2 507 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 TCEAL8Q8IYN2 117 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 STPG3Q8N7X2 389 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 MAGEB6Q8N7X4 407 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 TSPEARQ8WU66 669 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 HSPBAP1Q96EW2 488 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 NOX5Q96PH1 765 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 FOXB1Q99853 325 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 GORASP1Q9BQQ3 440 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 MCOLN1Q9GZU1 580 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 MTG2Q9H4K7 406 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 SIRT5Q9NXA8 310 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 USP36Q9P275 1121 aaKnown RBP5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 MBD1Q9UIS9 605 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 SERPINB13Q9UIV8 391 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 KCNG1Q9UIX4 513 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 ZFP69BQ9UJL9 534 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 TUBD1Q9UJT1 453 aa5.12□□□□□ -1.59
HMGB1P17-201ENST00000403495 ST20-MTHFSA0A0A6YYL1 179 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 VSTM5A8MXK1 200 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 ABLIM1O14639 778 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 PRC1O43663 620 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 RFPL1O75677 317 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 PFKMP08237 780 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 NCAM1P13591 858 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 ADCY8P40145 1251 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 CD83Q01151 205 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 KIF23Q02241 960 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 PPARAQ07869 468 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 SMAD4Q13485 552 aaKnown RBP5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 MLANAQ16655 118 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 RGL3Q3MIN7 710 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 TMEM240Q5SV17 173 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 KANSL1Q7Z3B3 1105 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 ZC3H18Q86VM9 953 aaKnown RBP5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 CCDC146Q8IYE0 955 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 DTX3Q8N9I9 347 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 IGDCC4Q8TDY8 1250 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 DCP1AQ9NPI6 582 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 GALNT8Q9NY28 637 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 ARHGAP20Q9P2F6 1191 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 CROTQ9UKG9 612 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 ANKRD6Q9Y2G4 727 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 GIT1Q9Y2X7 761 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 PCDHA5Q9Y5H7 936 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 MYPNQ86TC9 1320 aa5.11□□□□□ -1.59
HMGB1P17-201ENST00000403495 BIN1O00499 593 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 NDUFS2O75306 463 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 CYP2C8P10632 490 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 GNALP38405 381 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 ITGA1P56199 1179 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 ANTXR2P58335 489 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 ADAM9Q13443 819 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 ZNF267Q14586 743 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 MUM1Q2TAK8 710 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 TMEM132EQ6IEE7 984 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 SLC4A10Q6U841 1118 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 GAREM2Q75VX8 874 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 EPM2AIP1Q7L775 607 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 IGDCC3Q8IVU1 814 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 E2F7Q96AV8 911 aa5.1□□□□□ -1.59
HMGB1P17-201ENST00000403495 TIFAQ96CG3 184 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms