RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 NME8Q8N427 588 aa19.17■□□□□ 0.66
PTCHD3P3-201ENST00000403073 CCDC43Q96MW1 224 aaKnown RBP19.17■□□□□ 0.66
PTCHD3P3-201ENST00000403073 PPP1R16BQ96T49 567 aa19.17■□□□□ 0.66
PTCHD3P3-201ENST00000403073 GDF15Q99988 308 aa19.17■□□□□ 0.66
PTCHD3P3-201ENST00000403073 OSBPL7Q9BZF2 842 aa19.17■□□□□ 0.66
PTCHD3P3-201ENST00000403073 DHX33Q9H6R0 707 aaKnown RBP19.17■□□□□ 0.66
PTCHD3P3-201ENST00000403073 CIZ1Q9ULV3 898 aaPredicted RBP19.17■□□□□ 0.66
PTCHD3P3-201ENST00000403073 DNM3Q9UQ16 869 aa19.17■□□□□ 0.66
PTCHD3P3-201ENST00000403073 PPME1Q9Y570 386 aa19.17■□□□□ 0.66
PTCHD3P3-201ENST00000403073 NBNO60934 754 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 VTNP04004 478 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 TMOD1P28289 359 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 RFC5P40937 340 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 MRPS6P82932 125 aaKnown RBP19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 MGAT3Q09327 533 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 KARSQ15046 597 aaKnown RBP19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 IER5Q5VY09 327 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 C16orf59Q7L2K0 433 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 KCNG4Q8TDN1 519 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 SLC7A3Q8WY07 619 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 SYMPKQ92797 1274 aaKnown RBP19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 TMEM143Q96AN5 459 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 VWCEQ96DN2 955 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 CALML4Q96GE6 196 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 CDK5RAP3Q96JB5 506 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 IPO9Q96P70 1041 aaKnown RBP19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 PCDHA7Q9UN72 937 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 CDY2AQ9Y6F7 541 aa19.16■□□□□ 0.66
PTCHD3P3-201ENST00000403073 ARHGEF35A5YM69 484 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 CUTAO60888 179 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 ME1P48163 572 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 DNM2P50570 870 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 PPIGQ13427 754 aaKnown RBP eCLIP19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 EMC2Q15006 297 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 TMEM119Q4V9L6 283 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 AXDND1Q5T1B0 1012 aaPredicted RBP19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 PRPF38BQ5VTL8 546 aaKnown RBP19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 PADI6Q6TGC4 694 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 CHRDL2Q6WN34 429 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 RASSF8Q8NHQ8 419 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 LEO1Q8WVC0 666 aaPredicted RBP19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 ZNF668Q96K58 619 aaPredicted RBP19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 SPATA32Q96LK8 384 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 JPH2Q9BR39 696 aaPredicted RBP19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 CELF4Q9BZC1 486 aaKnown RBP19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 UBE2OQ9C0C9 1292 aaKnown RBP19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 CCSER1Q9C0I3 900 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 NT5C3AQ9H0P0 336 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 BHMT2Q9H2M3 363 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 CDHR5Q9HBB8 845 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 IL23AQ9NPF7 189 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 SUCLA2Q9P2R7 463 aaPredicted RBP19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 AKT3Q9Y243 479 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 KDM3AQ9Y4C1 1321 aa19.15■□□□□ 0.66
PTCHD3P3-201ENST00000403073 USO1O60763 962 aaKnown RBP19.14■□□□□ 0.65
PTCHD3P3-201ENST00000403073 DGAT1O75907 488 aa19.14■□□□□ 0.65
PTCHD3P3-201ENST00000403073 EYA4O95677 639 aa19.14■□□□□ 0.65
PTCHD3P3-201ENST00000403073 RPLP2P05387 115 aaKnown RBP19.14■□□□□ 0.65
PTCHD3P3-201ENST00000403073 RFC2P35250 354 aa19.14■□□□□ 0.65
PTCHD3P3-201ENST00000403073 MAEAQ7L5Y9 396 aa19.14■□□□□ 0.65
PTCHD3P3-201ENST00000403073 EXOC8Q8IYI6 725 aa19.14■□□□□ 0.65
PTCHD3P3-201ENST00000403073 MAP7D2Q96T17 732 aa19.14■□□□□ 0.65
PTCHD3P3-201ENST00000403073 PANK2Q9BZ23 570 aa19.14■□□□□ 0.65
PTCHD3P3-201ENST00000403073 XPNPEP1Q9NQW7 623 aa19.14■□□□□ 0.65
PTCHD3P3-201ENST00000403073 CHMP5Q9NZZ3 219 aa19.14■□□□□ 0.65
PTCHD3P3-201ENST00000403073 GINS2Q9Y248 185 aa19.14■□□□□ 0.65
PTCHD3P3-201ENST00000403073 TRPV2Q9Y5S1 764 aa19.14■□□□□ 0.65
PTCHD3P3-201ENST00000403073 M0QZ92 97 aa19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 SLC26A4O43511 780 aa19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 GPR32O75388 356 aa19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 PLCG1P19174 1290 aa19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 NLRP11P59045 1033 aaKnown RBP19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 KIZQ2M2Z5 673 aa19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 SHC4Q6S5L8 630 aa19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 KSR1Q8IVT5 923 aa19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 RPUSD2Q8IZ73 545 aaKnown RBP19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 LRRC15Q8TF66 581 aa19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 PRPF31Q8WWY3 499 aaKnown RBP19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 MTRQ99707 1265 aa19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 ATP6V0A4Q9HBG4 840 aa19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 GDPD2Q9HCC8 539 aa19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 POLD4Q9HCU8 107 aa19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 CCDC39Q9UFE4 941 aa19.13■□□□□ 0.65
PTCHD3P3-201ENST00000403073 PARNO95453 639 aaKnown RBP19.12■□□□□ 0.65
PTCHD3P3-201ENST00000403073 SSBP05455 408 aaKnown RBP eCLIP19.12■□□□□ 0.65
PTCHD3P3-201ENST00000403073 GHRP10912 638 aa19.12■□□□□ 0.65
PTCHD3P3-201ENST00000403073 BMP8BP34820 402 aa19.12■□□□□ 0.65
PTCHD3P3-201ENST00000403073 TCTN1Q2MV58 587 aa19.12■□□□□ 0.65
PTCHD3P3-201ENST00000403073 ZNF365Q70YC5 407 aa19.12■□□□□ 0.65
PTCHD3P3-201ENST00000403073 RHPN2Q8IUC4 686 aa19.12■□□□□ 0.65
PTCHD3P3-201ENST00000403073 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.12■□□□□ 0.65
PTCHD3P3-201ENST00000403073 SCAND2PQ9GZW5 306 aaPredicted RBP19.12■□□□□ 0.65
PTCHD3P3-201ENST00000403073 ADAMTS10Q9H324 1103 aa19.12■□□□□ 0.65
PTCHD3P3-201ENST00000403073 A0A087X0B3 334 aa19.11■□□□□ 0.65
PTCHD3P3-201ENST00000403073 FGBP02675 491 aa19.11■□□□□ 0.65
PTCHD3P3-201ENST00000403073 CXCL10P02778 98 aa19.11■□□□□ 0.65
PTCHD3P3-201ENST00000403073 PLA2G4BP0C869 781 aa19.11■□□□□ 0.65
PTCHD3P3-201ENST00000403073 CYP11B2P19099 503 aa19.11■□□□□ 0.65
PTCHD3P3-201ENST00000403073 TXLNAP40222 546 aa19.11■□□□□ 0.65
PTCHD3P3-201ENST00000403073 GPC3P51654 580 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms