RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 GPR155Q7Z3F1 870 aa4.35□□□□□ -1.71
CLHC1-201ENST00000401408 ZNF619Q8N2I2 560 aa4.35□□□□□ -1.71
CLHC1-201ENST00000401408 CBARPQ8N350 705 aaPredicted RBP4.35□□□□□ -1.71
CLHC1-201ENST00000401408 CPA6Q8N4T0 437 aa4.35□□□□□ -1.71
CLHC1-201ENST00000401408 GOLGA6L1Q8N7Z2 621 aa4.35□□□□□ -1.71
CLHC1-201ENST00000401408 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.35□□□□□ -1.71
CLHC1-201ENST00000401408 MPHOSPH9Q99550 1183 aa4.35□□□□□ -1.71
CLHC1-201ENST00000401408 TRIM56Q9BRZ2 755 aaKnown RBP4.35□□□□□ -1.71
CLHC1-201ENST00000401408 NOC4LQ9BVI4 516 aaKnown RBP4.35□□□□□ -1.71
CLHC1-201ENST00000401408 KIAA1683Q9H0B3 1180 aa4.35□□□□□ -1.71
CLHC1-201ENST00000401408 TRPV4Q9HBA0 871 aa4.35□□□□□ -1.71
CLHC1-201ENST00000401408 ARFGAP3Q9NP61 516 aa4.35□□□□□ -1.71
CLHC1-201ENST00000401408 PRDM5Q9NQX1 630 aaPredicted RBP4.35□□□□□ -1.71
CLHC1-201ENST00000401408 CABP1Q9NZU7 370 aa4.35□□□□□ -1.71
CLHC1-201ENST00000401408 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.35□□□□□ -1.71
CLHC1-201ENST00000401408 ANKIB1Q9P2G1 1089 aa4.35□□□□□ -1.71
CLHC1-201ENST00000401408 ZNF624Q9P2J8 865 aaPredicted RBP4.35□□□□□ -1.71
CLHC1-201ENST00000401408 LAMA3Q16787 3333 aa4.35□□□□□ -1.71
CLHC1-201ENST00000401408 PALLDQ8WX93 1383 aa4.35□□□□□ -1.71
CLHC1-201ENST00000401408 CEP290O15078 2479 aa4.35□□□□□ -1.71
CLHC1-201ENST00000401408 AFDNP55196 1824 aaKnown RBP4.34□□□□□ -1.71
CLHC1-201ENST00000401408 CCDC69A6NI79 296 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 SGSM2O43147 1006 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 USO1O60763 962 aaKnown RBP4.34□□□□□ -1.71
CLHC1-201ENST00000401408 STAM2O75886 525 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 FGFR1OPO95684 399 aaKnown RBP4.34□□□□□ -1.71
CLHC1-201ENST00000401408 ATP1A3P13637 1013 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 CD9P21926 228 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 L1CAMP32004 1257 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 HNF4AP41235 474 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 SKIV2L2P42285 1042 aaKnown RBP4.34□□□□□ -1.71
CLHC1-201ENST00000401408 MMEL1Q495T6 779 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 PKDCCQ504Y2 493 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 FKBP15Q5T1M5 1219 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 SLC30A6Q6NXT4 461 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 FAM117BQ6P1L5 589 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 PDZD4Q76G19 769 aaPredicted RBP4.34□□□□□ -1.71
CLHC1-201ENST00000401408 TMEM151BQ8IW70 566 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 PPM1KQ8N3J5 372 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 ESX1Q8N693 406 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 PCYOX1LQ8NBM8 494 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 DDX54Q8TDD1 881 aaKnown RBP4.34□□□□□ -1.71
CLHC1-201ENST00000401408 EPS8L3Q8TE67 593 aaKnown RBP4.34□□□□□ -1.71
CLHC1-201ENST00000401408 UCMAQ8WVF2 138 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 SCG3Q8WXD2 468 aaKnown RBP4.34□□□□□ -1.71
CLHC1-201ENST00000401408 USP13Q92995 863 aaPredicted RBP4.34□□□□□ -1.71
CLHC1-201ENST00000401408 CNDP1Q96KN2 507 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 CCDC114Q96M63 670 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 TMEM74Q96NL1 305 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 NACA2Q9H009 215 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 TSPYL1Q9H0U9 437 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 QPCTLQ9NXS2 382 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 NSMCE4AQ9NXX6 385 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 SUCOQ9UBS9 1254 aaKnown RBP4.34□□□□□ -1.71
CLHC1-201ENST00000401408 CDC23Q9UJX2 597 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 NOSIPQ9Y314 301 aaKnown RBP4.34□□□□□ -1.71
CLHC1-201ENST00000401408 SLC30A1Q9Y6M5 507 aa4.34□□□□□ -1.71
CLHC1-201ENST00000401408 ARPC4-TTLL3A0A0A6YYG9 625 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 F8VZ95 297 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 EIF3FO00303 357 aaPredicted RBP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 CTNND1O60716 968 aaKnown RBP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 USP2O75604 605 aaPredicted RBP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 SLITRK5O94991 958 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 LETM1O95202 739 aaPredicted RBP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 LTFP02788 710 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 ALAS1P13196 640 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 PBLDP30039 288 aaPredicted RBP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 MCM4P33991 863 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 IL6STP40189 918 aaPredicted RBP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 GCGRP47871 477 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 GIPRP48546 466 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 IL1RL1Q01638 556 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 BECN1Q14457 450 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 GRIN2CQ14957 1233 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 ODF1Q14990 250 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 TAF12Q16514 161 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 C5orf22Q49AR2 442 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 PRR16Q569H4 304 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 COX20Q5RI15 118 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 TYW1BQ6NUM6 668 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 PKN3Q6P5Z2 889 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 ALKBH5Q6P6C2 394 aaKnown RBP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 POMZP3Q6PJE2 187 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 GBP6Q6ZN66 633 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC186Q7Z3E2 898 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 RALYLQ86SE5 291 aaKnown RBP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 HEATR4Q86WZ0 1026 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 TRMT2AQ8IZ69 625 aaKnown RBP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 LINC00116Q8NCU8 138 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 RASSF8Q8NHQ8 419 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 SLC30A5Q8TAD4 765 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 DEPTORQ8TB45 409 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 ANKRD24Q8TF21 1146 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 DDX1Q92499 740 aaKnown RBP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 AIDAQ96BJ3 306 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 DHRS1Q96LJ7 313 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 COG8Q96MW5 612 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 AIFM3Q96NN9 605 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 IPO9Q96P70 1041 aaKnown RBP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 FAM193BQ96PV7 902 aaPredicted RBP4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms