RNA–Protein interactions for RNA: ENST00000399808.4

IFITM3-201, Transcript of interferon induced transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene IFITM3, Length 808 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-201ENST00000399808 MB21D2Q8IYB1 491 aaPredicted RBP17.17■□□□□ 0.34
IFITM3-201ENST00000399808 MRPL43Q8N983 215 aaKnown RBP17.17■□□□□ 0.34
IFITM3-201ENST00000399808 CTCFLQ8NI51 663 aaPredicted RBP17.17■□□□□ 0.34
IFITM3-201ENST00000399808 CASP10Q92851 521 aa17.17■□□□□ 0.34
IFITM3-201ENST00000399808 PPP1R16BQ96T49 567 aa17.17■□□□□ 0.34
IFITM3-201ENST00000399808 TMEM117Q9H0C3 514 aa17.17■□□□□ 0.34
IFITM3-201ENST00000399808 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
IFITM3-201ENST00000399808 LIMD1Q9UGP4 676 aa17.17■□□□□ 0.34
IFITM3-201ENST00000399808 SEC63Q9UGP8 760 aaKnown RBP17.17■□□□□ 0.34
IFITM3-201ENST00000399808 C2orf16Q68DN1 1984 aa17.17■□□□□ 0.34
IFITM3-201ENST00000399808 C2orf71A6NGG8 1288 aa17.16■□□□□ 0.34
IFITM3-201ENST00000399808 SPDYE3A6NKU9 549 aa17.16■□□□□ 0.34
IFITM3-201ENST00000399808 PI15O43692 258 aa17.16■□□□□ 0.34
IFITM3-201ENST00000399808 HBP1O60381 514 aa17.16■□□□□ 0.34
IFITM3-201ENST00000399808 CLASP2O75122 1294 aaKnown RBP17.16■□□□□ 0.34
IFITM3-201ENST00000399808 CCNE2O96020 404 aa17.16■□□□□ 0.34
IFITM3-201ENST00000399808 ATP4AP20648 1035 aa17.16■□□□□ 0.34
IFITM3-201ENST00000399808 ITIH3Q06033 890 aa17.16■□□□□ 0.34
IFITM3-201ENST00000399808 COL9A3Q14050 684 aaPredicted RBP17.16■□□□□ 0.34
IFITM3-201ENST00000399808 KIZQ2M2Z5 673 aa17.16■□□□□ 0.34
IFITM3-201ENST00000399808 CWF19L1Q69YN2 538 aaKnown RBP17.16■□□□□ 0.34
IFITM3-201ENST00000399808 CES5AQ6NT32 575 aa17.16■□□□□ 0.34
IFITM3-201ENST00000399808 ZDHHC14Q8IZN3 488 aa17.16■□□□□ 0.34
IFITM3-201ENST00000399808 C12orf76Q8N812 135 aaPredicted RBP17.16■□□□□ 0.34
IFITM3-201ENST00000399808 ZNF558Q96NG5 402 aa17.16■□□□□ 0.34
IFITM3-201ENST00000399808 NECTIN4Q96NY8 510 aa17.16■□□□□ 0.34
IFITM3-201ENST00000399808 OSMRQ99650 979 aa17.16■□□□□ 0.34
IFITM3-201ENST00000399808 CACNA1AO00555 2505 aa17.15■□□□□ 0.34
IFITM3-201ENST00000399808 GPR32O75388 356 aa17.15■□□□□ 0.34
IFITM3-201ENST00000399808 DDAH1O94760 285 aa17.15■□□□□ 0.34
IFITM3-201ENST00000399808 KIF5BP33176 963 aa17.15■□□□□ 0.34
IFITM3-201ENST00000399808 SLC26A2P50443 739 aa17.15■□□□□ 0.34
IFITM3-201ENST00000399808 CRYBB1P53674 252 aaPredicted RBP17.15■□□□□ 0.34
IFITM3-201ENST00000399808 ODR4Q5SWX8 454 aa17.15■□□□□ 0.34
IFITM3-201ENST00000399808 ABHD15Q6UXT9 468 aa17.15■□□□□ 0.34
IFITM3-201ENST00000399808 LZTS2Q9BRK4 669 aa17.15■□□□□ 0.34
IFITM3-201ENST00000399808 SDF4Q9BRK5 362 aa17.15■□□□□ 0.34
IFITM3-201ENST00000399808 AGO4Q9HCK5 861 aaKnown RBP17.15■□□□□ 0.34
IFITM3-201ENST00000399808 SPG21Q9NZD8 308 aa17.15■□□□□ 0.34
IFITM3-201ENST00000399808 EP300Q09472 2414 aaPredicted RBP17.15■□□□□ 0.34
IFITM3-201ENST00000399808 NPR3P17342 541 aa17.14■□□□□ 0.33
IFITM3-201ENST00000399808 RXRAP19793 462 aa17.14■□□□□ 0.33
IFITM3-201ENST00000399808 MTHFRP42898 656 aa17.14■□□□□ 0.33
IFITM3-201ENST00000399808 KRT17Q04695 432 aa17.14■□□□□ 0.33
IFITM3-201ENST00000399808 SMC1AQ14683 1233 aaKnown RBP17.14■□□□□ 0.33
IFITM3-201ENST00000399808 RARS2Q5T160 578 aaKnown RBP17.14■□□□□ 0.33
IFITM3-201ENST00000399808 MCTP2Q6DN12 878 aa17.14■□□□□ 0.33
IFITM3-201ENST00000399808 CCDC60Q8IWA6 550 aaPredicted RBP17.14■□□□□ 0.33
IFITM3-201ENST00000399808 SLC39A11Q8N1S5 342 aa17.14■□□□□ 0.33
IFITM3-201ENST00000399808 PGBD1Q96JS3 809 aa17.14■□□□□ 0.33
IFITM3-201ENST00000399808 RWDD1Q9H446 243 aaPredicted RBP17.14■□□□□ 0.33
IFITM3-201ENST00000399808 COL1A2P08123 1366 aa17.14■□□□□ 0.33
IFITM3-201ENST00000399808 MEIS1O00470 390 aa17.13■□□□□ 0.33
IFITM3-201ENST00000399808 VTNP04004 478 aa17.13■□□□□ 0.33
IFITM3-201ENST00000399808 PPM1AP35813 382 aa17.13■□□□□ 0.33
IFITM3-201ENST00000399808 GNAQP50148 359 aa17.13■□□□□ 0.33
IFITM3-201ENST00000399808 ZNF484Q5JVG2 852 aa17.13■□□□□ 0.33
IFITM3-201ENST00000399808 CLLU1OSQ5K130 101 aa17.13■□□□□ 0.33
IFITM3-201ENST00000399808 CCDC82Q8N4S0 544 aa17.13■□□□□ 0.33
IFITM3-201ENST00000399808 MFSD1Q9H3U5 465 aa17.13■□□□□ 0.33
IFITM3-201ENST00000399808 NT5C1B-RDH14C9J2C7 533 aa17.12■□□□□ 0.33
IFITM3-201ENST00000399808 DDX39AO00148 427 aaKnown RBP17.12■□□□□ 0.33
IFITM3-201ENST00000399808 C22orf31O95567 290 aa17.12■□□□□ 0.33
IFITM3-201ENST00000399808 CXCL14O95715 111 aa17.12■□□□□ 0.33
IFITM3-201ENST00000399808 GSPT1P15170 499 aaKnown RBP17.12■□□□□ 0.33
IFITM3-201ENST00000399808 CEP55Q53EZ4 464 aa17.12■□□□□ 0.33
IFITM3-201ENST00000399808 KIAA1841Q6NSI8 718 aa17.12■□□□□ 0.33
IFITM3-201ENST00000399808 TYW1BQ6NUM6 668 aa17.12■□□□□ 0.33
IFITM3-201ENST00000399808 ECHDC2Q86YB7 292 aa17.12■□□□□ 0.33
IFITM3-201ENST00000399808 LRRC43Q8N309 656 aa17.12■□□□□ 0.33
IFITM3-201ENST00000399808 TDRD5Q8NAT2 981 aaKnown RBP17.12■□□□□ 0.33
IFITM3-201ENST00000399808 FLCNQ8NFG4 579 aa17.12■□□□□ 0.33
IFITM3-201ENST00000399808 USTQ9Y2C2 406 aa17.12■□□□□ 0.33
IFITM3-201ENST00000399808 FANCMQ8IYD8 2048 aa17.12■□□□□ 0.33
IFITM3-201ENST00000399808 ZNF292O60281 2723 aa17.11■□□□□ 0.33
IFITM3-201ENST00000399808 BACH1O14867 736 aa17.11■□□□□ 0.33
IFITM3-201ENST00000399808 DHX15O43143 795 aaKnown RBP17.11■□□□□ 0.33
IFITM3-201ENST00000399808 EPCAMP16422 314 aa17.11■□□□□ 0.33
IFITM3-201ENST00000399808 AOC1P19801 751 aa17.11■□□□□ 0.33
IFITM3-201ENST00000399808 SWSAP1Q6NVH7 229 aa17.11■□□□□ 0.33
IFITM3-201ENST00000399808 PDXDC2PQ6P474 469 aa17.11■□□□□ 0.33
IFITM3-201ENST00000399808 RAB11FIP4Q86YS3 637 aa17.11■□□□□ 0.33
IFITM3-201ENST00000399808 PLCD3Q8N3E9 789 aa17.11■□□□□ 0.33
IFITM3-201ENST00000399808 SLC22A17Q8WUG5 538 aa17.11■□□□□ 0.33
IFITM3-201ENST00000399808 AUTS2Q8WXX7 1259 aa17.11■□□□□ 0.33
IFITM3-201ENST00000399808 ZNF302Q9NR11 478 aa17.11■□□□□ 0.33
IFITM3-201ENST00000399808 HOXA2O43364 376 aa17.1■□□□□ 0.33
IFITM3-201ENST00000399808 EOMESO95936 686 aa17.1■□□□□ 0.33
IFITM3-201ENST00000399808 CHMLP26374 656 aa17.1■□□□□ 0.33
IFITM3-201ENST00000399808 ATAT1Q5SQI0 421 aa17.1■□□□□ 0.33
IFITM3-201ENST00000399808 FAM160B1Q5W0V3 765 aa17.1■□□□□ 0.33
IFITM3-201ENST00000399808 HEATR3Q7Z4Q2 680 aa17.1■□□□□ 0.33
IFITM3-201ENST00000399808 ZNF598Q86UK7 904 aaKnown RBP17.1■□□□□ 0.33
IFITM3-201ENST00000399808 CCDC105Q8IYK2 499 aa17.1■□□□□ 0.33
IFITM3-201ENST00000399808 ADAMTS10Q9H324 1103 aa17.1■□□□□ 0.33
IFITM3-201ENST00000399808 CYP26B1Q9NR63 512 aa17.1■□□□□ 0.33
IFITM3-201ENST00000399808 DBR1Q9UK59 544 aaKnown RBP17.1■□□□□ 0.33
IFITM3-201ENST00000399808 MED19A0JLT2 244 aaPredicted RBP17.09■□□□□ 0.33
IFITM3-201ENST00000399808 SH2B2O14492 632 aaPredicted RBP17.09■□□□□ 0.33
IFITM3-201ENST00000399808 PRC1O43663 620 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms