RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 ETNK1Q9HBU6 452 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 CTIFO43310 598 aaKnown RBP12.04□□□□□ -0.48
LAMA3-203ENST00000399516 KITP10721 976 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 TMEM259Q4ZIN3 620 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 FMR1NBQ8N0W7 255 aaPredicted RBP12.04□□□□□ -0.48
LAMA3-203ENST00000399516 MSTO1Q9BUK6 570 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 ANAPC7Q9UJX3 599 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 CHRNA3P32297 505 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 ZBTB33Q86T24 672 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.04□□□□□ -0.48
LAMA3-203ENST00000399516 ING2Q9H160 280 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 SLC4A7Q9Y6M7 1214 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 PSAPP07602 524 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 OR6B2Q6IFH4 312 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 DYNLL2Q96FJ2 89 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 SUN2Q9UH99 717 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 DNAJC12Q9UKB3 198 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 RAD23BP54727 409 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 CTTNQ14247 550 aaKnown RBP12.04□□□□□ -0.48
LAMA3-203ENST00000399516 FAM47CQ5HY64 1035 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 GADL1Q6ZQY3 521 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 RASSF3Q86WH2 238 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 WDR75Q8IWA0 830 aaKnown RBP12.04□□□□□ -0.48
LAMA3-203ENST00000399516 ICA1LQ8NDH6 482 aa12.04□□□□□ -0.48
LAMA3-203ENST00000399516 FAM193BQ96PV7 902 aaPredicted RBP12.04□□□□□ -0.48
LAMA3-203ENST00000399516 ADCY10Q96PN6 1610 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 ANKARQ7Z5J8 1434 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 GOLGA8MH3BSY2 632 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 RAD54LQ92698 747 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 MRPL40Q9NQ50 206 aaKnown RBP12.03□□□□□ -0.48
LAMA3-203ENST00000399516 ZSWIM5Q9P217 1185 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 NXF1Q9UBU9 619 aaKnown RBP12.03□□□□□ -0.48
LAMA3-203ENST00000399516 WARS2Q9UGM6 360 aaKnown RBP12.03□□□□□ -0.48
LAMA3-203ENST00000399516 PPEF1O14829 653 aaPredicted RBP12.03□□□□□ -0.48
LAMA3-203ENST00000399516 RASGRF1Q13972 1273 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 TTLL11Q8NHH1 800 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 UBN1Q9NPG3 1134 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 CALB1P05937 261 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 TEDDM1Q5T9Z0 273 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 ARHGAP18Q8N392 663 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 EPN3Q9H201 632 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 ADGRG1Q9Y653 693 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 WDR17Q8IZU2 1322 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 ARHGEF40Q8TER5 1519 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 SPDYE2BA6NHP3 402 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 INO80B-WBP1J3KQ70 363 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 SPDYE6P0CI01 402 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 PCYT1AP49585 367 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 ARL13BQ3SXY8 428 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 INO80BQ9C086 356 aaPredicted RBP12.03□□□□□ -0.48
LAMA3-203ENST00000399516 KIF9Q9HAQ2 790 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 L3MBTL1Q9Y468 752 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 ZBTB18Q99592 522 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 NBPF3Q9H094 633 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 DCTN4Q9UJW0 460 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 USP17L3A6NCW0 530 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 USP17L4A6NCW7 530 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 KCNA4P22459 653 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 COASYQ13057 564 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 USP17L1Q7RTZ2 530 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 COG1Q8WTW3 980 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 SH3GL3Q99963 347 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 SUCLA2Q9P2R7 463 aaPredicted RBP12.03□□□□□ -0.48
LAMA3-203ENST00000399516 USP6P35125 1406 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 TBC1D10CQ8IV04 446 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 FAM161BQ96MY7 647 aa12.03□□□□□ -0.48
LAMA3-203ENST00000399516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.03□□□□□ -0.48
LAMA3-203ENST00000399516 ATP1A1P05023 1023 aaKnown RBP12.02□□□□□ -0.48
LAMA3-203ENST00000399516 RASSF10A6NK89 507 aa12.02□□□□□ -0.48
LAMA3-203ENST00000399516 BCORL1Q5H9F3 1711 aa12.02□□□□□ -0.48
LAMA3-203ENST00000399516 AK9Q5TCS8 1911 aa12.02□□□□□ -0.48
LAMA3-203ENST00000399516 HNRNPCL2B2RXH8 293 aa12.02□□□□□ -0.48
LAMA3-203ENST00000399516 HNRNPCL1O60812 293 aaKnown RBP12.02□□□□□ -0.48
LAMA3-203ENST00000399516 USP17L8P0C7I0 530 aa12.02□□□□□ -0.48
LAMA3-203ENST00000399516 DOK7Q18PE1 504 aa12.02□□□□□ -0.48
LAMA3-203ENST00000399516 ZNF564Q8TBZ8 553 aaPredicted RBP12.02□□□□□ -0.48
LAMA3-203ENST00000399516 BTBD6Q96KE9 485 aa12.02□□□□□ -0.48
LAMA3-203ENST00000399516 MORF4L2Q15014 288 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 CDO1Q16878 200 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 TRPC5Q9UL62 973 aaPredicted RBP12.02□□□□□ -0.49
LAMA3-203ENST00000399516 MBD5Q9P267 1494 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 ARHGAP10A1A4S6 786 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 POTEMA6NI47 508 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 SYCE1LA8MT33 242 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 PAMP19021 973 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 ZCCHC17Q9NP64 241 aaKnown RBP12.02□□□□□ -0.49
LAMA3-203ENST00000399516 FBXL5Q9UKA1 691 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 SPHKAPQ2M3C7 1700 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 KPNA7A9QM74 516 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 PRCPP42785 496 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 USP17L2Q6R6M4 530 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 VPS39Q96JC1 886 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 TTC1Q99614 292 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 SLITRK6Q9H5Y7 841 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 PIH1D3Q9NQM4 214 aaKnown RBP12.02□□□□□ -0.49
LAMA3-203ENST00000399516 RARS2Q5T160 578 aaKnown RBP12.02□□□□□ -0.49
LAMA3-203ENST00000399516 DDX47Q9H0S4 455 aaKnown RBP12.02□□□□□ -0.49
LAMA3-203ENST00000399516 NLRP1Q9C000 1473 aa12.02□□□□□ -0.49
LAMA3-203ENST00000399516 WDR64B1ANS9 1081 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms