RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 GIMAP7Q8NHV1 300 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 VCPKMTQ9H867 229 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 EMILIN3Q9NT22 766 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 GCNT4Q9P109 453 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 SEL1LQ9UBV2 794 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 TJP2Q9UDY2 1190 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 LRRC7Q96NW7 1537 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 SART1O43290 800 aaKnown RBP8.56□□□□□ -1.04
USP47-203ENST00000399455 PTPAQ15257 358 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 FAM117BQ6P1L5 589 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 ERICH1Q86X53 443 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 APPL2Q8NEU8 664 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 DYDC2Q96IM9 177 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 EVA1BQ9NVM1 165 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 KIAA1210Q9ULL0 1709 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 SGK1O00141 431 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 MAFGO15525 162 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 GGPS1O95749 300 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 GYS1P13807 737 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 SCP2P22307 547 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 C10orf76Q5T2E6 689 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 DENND2CQ68D51 928 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 SMAP1Q8IYB5 467 aaPredicted RBP8.56□□□□□ -1.04
USP47-203ENST00000399455 TRIM58Q8NG06 486 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 P2RX5Q93086 422 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 ZNF653Q96CK0 615 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 SRPK1Q96SB4 655 aaKnown RBP8.56□□□□□ -1.04
USP47-203ENST00000399455 TUFT1Q9NNX1 390 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 PNPLA7Q6ZV29 1317 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 CLIC2O15247 247 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 MSCO60682 206 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 IFNB1P01574 187 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 ATP6V1E2Q96A05 226 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 HDAC11Q96DB2 347 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 MFSD1Q9H3U5 465 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 MST1RQ04912 1400 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 IPO5O00410 1097 aaKnown RBP8.56□□□□□ -1.04
USP47-203ENST00000399455 NTSR2O95665 410 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 RAPH1Q70E73 1250 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 SEPT1Q8WYJ6 367 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 SP110Q9HB58 689 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 HMX1Q9NP08 348 aaPredicted RBP8.56□□□□□ -1.04
USP47-203ENST00000399455 ZNF212Q9UDV6 495 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 STK36Q9NRP7 1315 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 ZC3H4Q9UPT8 1303 aaKnown RBP8.56□□□□□ -1.04
USP47-203ENST00000399455 KRT15P19012 456 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 FOXO4P98177 505 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 SEPT6Q14141 434 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 QRICH1Q2TAL8 776 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 SV2CQ496J9 727 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 CYFIP1Q7L576 1253 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 ARHGAP18Q8N392 663 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 GSDMAQ96QA5 445 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 FBXL21Q9UKT6 434 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 PHLPP1O60346 1717 aa8.56□□□□□ -1.04
USP47-203ENST00000399455 RAG1P15918 1043 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 THPOP40225 353 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 ALX1Q15699 326 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 DCAF4L1Q3SXM0 396 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 DNAAF3Q8N9W5 541 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 TMEM39BQ9GZU3 492 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 BCAP29Q9UHQ4 241 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 CLGNO14967 610 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 PRKCBP05771 671 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 MYPNQ86TC9 1320 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 NBPF15Q8N660 670 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 NEDD1Q8NHV4 660 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 ASNSD1Q9NWL6 643 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 ZW10O43264 779 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 HBP1O60381 514 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 CPP00450 1065 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 EGFRP00533 1210 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 EEF1GP26641 437 aaKnown RBP8.55□□□□□ -1.04
USP47-203ENST00000399455 CYP4A22Q5TCH4 519 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 DARS2Q6PI48 645 aaKnown RBP8.55□□□□□ -1.04
USP47-203ENST00000399455 TMEM169Q96HH4 297 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 PLSCR1O15162 318 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 DDX5P17844 614 aaKnown RBP8.55□□□□□ -1.04
USP47-203ENST00000399455 SAMD3Q8N6K7 520 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 PKNOX2Q96KN3 472 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 HAUS8Q9BT25 410 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 MAGEB5Q9BZ81 275 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.55□□□□□ -1.04
USP47-203ENST00000399455 MAD1L1Q9Y6D9 718 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 KDM1AO60341 852 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 CALB1P05937 261 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 MCM6Q14566 821 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 TMEM132BQ14DG7 1078 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 SPATA1Q5VX52 437 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 SHCBP1Q8NEM2 672 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 PRIMPOLQ96LW4 560 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 LXNQ9BS40 222 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 PDHXO00330 501 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 H2AFZP0C0S5 128 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 CYP2C9P11712 490 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 FKBP3Q00688 224 aaKnown RBP8.55□□□□□ -1.04
USP47-203ENST00000399455 MAN2A1Q16706 1144 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 XKR3Q5GH77 459 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 H2AFVQ71UI9 128 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 EMILIN2Q9BXX0 1053 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms