RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 ZC2HC1CQ53FD0 456 aaPredicted RBP10.39□□□□□ -0.75
LINC00243-201ENST00000399196 TRMT1LQ7Z2T5 733 aaKnown RBP10.39□□□□□ -0.75
LINC00243-201ENST00000399196 LRRN4CLQ8ND94 238 aa10.39□□□□□ -0.75
LINC00243-201ENST00000399196 GPRC5AQ8NFJ5 357 aa10.39□□□□□ -0.75
LINC00243-201ENST00000399196 RDM1Q8NG50 284 aa10.39□□□□□ -0.75
LINC00243-201ENST00000399196 CCDC51Q96ER9 411 aa10.39□□□□□ -0.75
LINC00243-201ENST00000399196 PTPN18Q99952 460 aa10.39□□□□□ -0.75
LINC00243-201ENST00000399196 KCND2Q9NZV8 630 aa10.39□□□□□ -0.75
LINC00243-201ENST00000399196 SLC9A2Q9UBY0 812 aa10.39□□□□□ -0.75
LINC00243-201ENST00000399196 SLC45A1Q9Y2W3 748 aa10.39□□□□□ -0.75
LINC00243-201ENST00000399196 PCDHA10Q9Y5I2 948 aa10.39□□□□□ -0.75
LINC00243-201ENST00000399196 SOWAHBA6NEL2 793 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 SPATA31C2B4DYI2 1134 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 TGFB1I1O43294 461 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 CTIFO43310 598 aaKnown RBP10.38□□□□□ -0.75
LINC00243-201ENST00000399196 SORBS3O60504 671 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 FGFR1OPO95684 399 aaKnown RBP10.38□□□□□ -0.75
LINC00243-201ENST00000399196 SLC10A3P09131 477 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 KCNA2P16389 499 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 GAP43P17677 238 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 ZNF131P52739 623 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 HTRA3P83110 453 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 APBA1Q02410 837 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 TRIM14Q14142 442 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 KNOP1Q1ED39 458 aaKnown RBP10.38□□□□□ -0.75
LINC00243-201ENST00000399196 BMT2Q1RMZ1 405 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 ANKRD23Q86SG2 305 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 GPIHBP1Q8IV16 184 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 SMAP1Q8IYB5 467 aaPredicted RBP10.38□□□□□ -0.75
LINC00243-201ENST00000399196 ZNF710Q8N1W2 664 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 MYCT1Q8N699 235 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 ANKRD13CQ8N6S4 541 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 FAM133AQ8N9E0 248 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 NAA15Q9BXJ9 866 aaKnown RBP10.38□□□□□ -0.75
LINC00243-201ENST00000399196 TRAF3IP3Q9Y228 551 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 LUC7L2Q9Y383 392 aaKnown RBP10.38□□□□□ -0.75
LINC00243-201ENST00000399196 PAXBP1Q9Y5B6 917 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 PCNTO95613 3336 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 NFASCO94856 1347 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 DKC1O60832 514 aaKnown RBP eCLIP10.38□□□□□ -0.75
LINC00243-201ENST00000399196 PSAPP07602 524 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 TRIM21P19474 475 aaKnown RBP10.38□□□□□ -0.75
LINC00243-201ENST00000399196 YWHABP31946 246 aaKnown RBP10.38□□□□□ -0.75
LINC00243-201ENST00000399196 CASP4P49662 377 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 MARSP56192 900 aaKnown RBP10.38□□□□□ -0.75
LINC00243-201ENST00000399196 PADI6Q6TGC4 694 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 TRIM59Q8IWR1 403 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 SHCBP1Q8NEM2 672 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 OR8K1Q8NGG5 319 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 ATP6V0A1Q93050 837 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 SENP7Q9BQF6 1050 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 EFCC1Q9HA90 598 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 PARVGQ9HBI0 331 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 OLFML3Q9NRN5 406 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 DNAI1Q9UI46 699 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 TFR2Q9UP52 801 aa10.38□□□□□ -0.75
LINC00243-201ENST00000399196 ZSCAN12O43309 604 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 LYPLA2O95372 231 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 GCNT3O95395 438 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 NR2F2P24468 414 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 ARHGAP25P42331 645 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 GCLCP48506 637 aaPredicted RBP10.37□□□□□ -0.75
LINC00243-201ENST00000399196 ADAM9Q13443 819 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 MEA1Q16626 185 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 EDRF1Q3B7T1 1238 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 CYP4F22Q6NT55 531 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 MIS18BP1Q6P0N0 1132 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 CYFIP1Q7L576 1253 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 EEPD1Q7L9B9 569 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 TMTC1Q8IUR5 882 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 C4orf19Q8IY42 314 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 KIF18AQ8NI77 898 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 CEP63Q96MT8 703 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 MAP7D2Q96T17 732 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 PARK7Q99497 189 aaKnown RBP10.37□□□□□ -0.75
LINC00243-201ENST00000399196 PORCNQ9H237 461 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 FAM207AQ9NSI2 230 aaPredicted RBP10.37□□□□□ -0.75
LINC00243-201ENST00000399196 GABBR1Q9UBS5 961 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 DBR1Q9UK59 544 aaKnown RBP10.37□□□□□ -0.75
LINC00243-201ENST00000399196 ODF2LQ9ULJ1 636 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 IGF2BP3O00425 579 aaKnown RBP eCLIP10.37□□□□□ -0.75
LINC00243-201ENST00000399196 DYNC1I1O14576 645 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 BACH1O14867 736 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 CLIC2O15247 247 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 USO1O60763 962 aaKnown RBP10.37□□□□□ -0.75
LINC00243-201ENST00000399196 AKAP3O75969 853 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 NOL4O94818 638 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 PLEKP08567 350 aaPredicted RBP10.37□□□□□ -0.75
LINC00243-201ENST00000399196 CCDC175P0C221 793 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 EDNRBP24530 442 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 ICAM3P32942 547 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 RARRES1P49788 294 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 APLP1P51693 650 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 ACTR2P61160 394 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 RBM10P98175 930 aaKnown RBP10.37□□□□□ -0.75
LINC00243-201ENST00000399196 GRM1Q13255 1194 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 FIGNQ5HY92 759 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 UTP14CQ5TAP6 766 aaKnown RBP10.37□□□□□ -0.75
LINC00243-201ENST00000399196 SWSAP1Q6NVH7 229 aa10.37□□□□□ -0.75
LINC00243-201ENST00000399196 DPY19L2P1Q6NXN4 242 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms