RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 FAM237AA0A1B0GTK4 181 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 MAFO75444 373 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 GNAT1P11488 350 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 SLC12A3P55017 1021 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 TBC1D8BQ0IIM8 1120 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 GPNMBQ14956 572 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 OTUD6AQ7L8S5 288 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 RPAINQ86UA6 219 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 KIAA0319LQ8IZA0 1049 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 TMEM87AQ8NBN3 555 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 VWCEQ96DN2 955 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 PANK2Q9BZ23 570 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 OSBPL7Q9BZF2 842 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 NT5C3AQ9H0P0 336 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 WNT8AQ9H1J5 351 aa13.84□□□□□ -0.19
HLA-DQB1-203ENST00000399082 SCN5AQ14524 2016 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 SMIM35A0A1B0GVV1 85 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 A0A1W2PQ27 194 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 A0A1W2PQ64 194 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 A0A1W2PQD8 194 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 MAGEB2O15479 319 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 EVI5O60447 810 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 USO1O60763 962 aaKnown RBP13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CKBP12277 381 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 PFKFB1P16118 471 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CMA1P23946 247 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 MGAT3Q09327 533 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 MCM6Q14566 821 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 EMC2Q15006 297 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 EFCAB12Q6NXP0 572 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 TAF2Q6P1X5 1199 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 PDILTQ8N807 584 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 DNAJB3Q8WWF6 145 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 RAD54LQ92698 747 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 DPF3Q92784 378 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CALML4Q96GE6 196 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 RUSC1Q9BVN2 902 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 FAM49AQ9H0Q0 323 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 HIPK3Q9H422 1215 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 TMEM39AQ9NV64 488 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 ZMYND8Q9ULU4 1186 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 DNM3Q9UQ16 869 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 NOD1Q9Y239 953 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 PPME1Q9Y570 386 aa13.83□□□□□ -0.2
HLA-DQB1-203ENST00000399082 A0A1B0GVL5 298 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 ARHGEF35A5YM69 484 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 GADD45BO75293 160 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 PLA2G4BP0C869 781 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 SYN1P17600 705 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CYP2C18P33260 490 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 RFC5P40937 340 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 MAPK7Q13164 816 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 MBTPS1Q14703 1052 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 ARSHQ5FYA8 562 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 ZNF618Q5T7W0 954 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 RINT1Q6NUQ1 792 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 PADI6Q6TGC4 694 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 C1orf186Q6ZWK4 172 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 DAW1Q8N136 415 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 KCTD17Q8N5Z5 321 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 SYT2Q8N9I0 419 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 TMEM143Q96AN5 459 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CDK5RAP3Q96JB5 506 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 MTRQ99707 1265 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 PPP1R12CQ9BZL4 782 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 GPRC5CQ9NQ84 441 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 PRDM5Q9NQX1 630 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 STK17AQ9UEE5 414 aa13.82□□□□□ -0.2
HLA-DQB1-203ENST00000399082 DGAT1O75907 488 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CHRNA1P02708 482 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 VTNP04004 478 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CYP11B2P19099 503 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 TXLNAP40222 546 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 THPOP40225 353 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 NDUFA8P51970 172 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 POLGP54098 1239 aaPredicted RBP13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 TPRNQ4KMQ1 711 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 FAM26DQ5JW98 314 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 RRAGBQ5VZM2 374 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CCDC73Q6ZRK6 1079 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 METTL13Q8N6R0 699 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CAGE1Q8TC20 777 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 ASAP3Q8TDY4 903 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 SLC7A3Q8WY07 619 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 LARP4BQ92615 738 aaKnown RBP13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 SCLYQ96I15 445 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 SUGCTQ9HAC7 445 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CDHR5Q9HBB8 845 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 ATP6V0A4Q9HBG4 840 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 POLD4Q9HCU8 107 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CCDC39Q9UFE4 941 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 KCNH3Q9ULD8 1083 aa13.81□□□□□ -0.2
HLA-DQB1-203ENST00000399082 NPHP3-ACAD11A0A0J9YXS1 232 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 POLR2DO15514 142 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 ACTN4O43707 911 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CAND2O75155 1236 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 GPR32O75388 356 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 TIMP1P01033 207 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 CTSHP09668 335 aa13.8□□□□□ -0.2
HLA-DQB1-203ENST00000399082 ARL2P36404 184 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms