RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 HS3ST6Q96QI5 342 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 PIGSQ96S52 555 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 TRAIPQ9BWF2 469 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 AZI2Q9H6S1 392 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 ABCF3Q9NUQ8 709 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 PANK4Q9NVE7 773 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 BARHL2Q9NY43 387 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 CEP72Q9P209 647 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 MAD2L2Q9UI95 211 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 THRAP3Q9Y2W1 955 aaKnown RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 UTP11Q9Y3A2 253 aaKnown RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 FRMPD2Q68DX3 1309 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 CCT8L1PA6NM43 557 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 TMEM110-MUSTN1A8MSY1 372 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 A8MUI8 341 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 SLC8A1P32418 973 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 CCNHP51946 323 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 KCNJ2P63252 427 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 ADAM9Q13443 819 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 ZKSCAN8Q15776 578 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 WLSQ5T9L3 541 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 KRT79Q5XKE5 535 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 DZIP1Q86YF9 867 aaKnown RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 CCT6BQ92526 530 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 FAXDC2Q96IV6 333 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 SAMD15Q9P1V8 674 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 DBR1Q9UK59 544 aaKnown RBP10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 BCS1LQ9Y276 419 aa10.75□□□□□ -0.69
PTCHD4-202ENST00000398738 CCDC189A1A4V9 331 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 BHMG1C9JSJ3 638 aaPredicted RBP10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 C21orf2O43822 256 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 PLCB4Q15147 1175 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 FAM26FQ5R3K3 315 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 GUF1Q8N442 669 aaKnown RBP10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 CUL5Q93034 780 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 PNMA5Q96PV4 448 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 FMO2Q99518 471 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 INTS9Q9NV88 658 aaKnown RBP10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 SEC63Q9UGP8 760 aaKnown RBP10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 E9PMD0 336 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 BIRC3Q13489 604 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 CUL1Q13616 776 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 TRIM68Q6AZZ1 485 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 AADACL2Q6P093 401 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 TMC3Q7Z5M5 1100 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 CCDC50Q8IVM0 306 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 MAPKAPK5Q8IW41 473 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 ANKRD42Q8N9B4 389 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 TGFBRAP1Q8WUH2 860 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 NSUN4Q96CB9 384 aaKnown RBP10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 FAM84BQ96KN1 310 aaPredicted RBP10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 TMEM47Q9BQJ4 181 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 KIF9Q9HAQ2 790 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 C6orf50Q9HD87 102 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 OSGEPQ9NPF4 335 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 DNAJC17Q9NVM6 304 aaKnown RBP10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 PCDHGC5Q9Y5F6 944 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 SCN11AQ9UI33 1791 aa10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 ATXN2Q99700 1313 aaKnown RBP10.74□□□□□ -0.69
PTCHD4-202ENST00000398738 F8VZ95 297 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 ORC4O43929 436 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 DRP2Q13474 957 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 ECM1Q16610 540 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 UBE2SQ16763 222 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 TMEM266Q2M3C6 531 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 TUSC1Q2TAM9 212 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 SPICE1Q8N0Z3 855 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 CCDC26Q8TAB7 109 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 ACSBG1Q96GR2 724 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 AK8Q96MA6 479 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 LBHD1Q9BQE6 289 aaPredicted RBP10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 OCSTAMPQ9BR26 566 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 CUEDC2Q9H467 287 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 PKD1L3Q7Z443 1732 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 RGS16O15492 202 aaPredicted RBP10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 USP11P51784 963 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 KCNQ4P56696 695 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 COASYQ13057 564 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 LRIG3Q6UXM1 1119 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 REXO1Q8N1G1 1221 aaKnown RBP10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 AGAP11Q8TF27 550 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 WBP1LQ9NX94 342 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 ARPP21Q9UBL0 812 aaPredicted RBP10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 TRIM33Q9UPN9 1127 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 MYH6P13533 1939 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 GFPT2O94808 682 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 FGFR4P22455 802 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 MAP2K1Q02750 393 aaPredicted RBP10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 LRRC63Q05C16 580 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 SLC29A2Q14542 456 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 BRINP3Q76B58 766 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 KRT25Q7Z3Z0 450 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 SCUBE3Q8IX30 993 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 FAM163AQ96GL9 167 aaPredicted RBP10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 PAGR1Q9BTK6 254 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 YIPF3Q9GZM5 350 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 TMOD4Q9NZQ9 345 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms