RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 MKRN3Q13064 507 aaKnown RBP11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 TRADDQ15628 312 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 AGBL2Q5U5Z8 902 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 PDXDC2PQ6P474 469 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 CCDC197Q8NCU1 140 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 PCMTD1Q96MG8 357 aaPredicted RBP11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 KRT12Q99456 494 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 MTRQ99707 1265 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 ZNF341Q9BYN7 854 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 IRAK4Q9NWZ3 460 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 SLC5A4Q9NY91 659 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 SLC12A4Q9UP95 1085 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 CLEC11AQ9Y240 323 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 ATRNL1Q5VV63 1379 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 LAMA3Q16787 3333 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 CFAP73A6NFT4 308 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 DIAPH2O60879 1101 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 PPP1R11O60927 126 aaPredicted RBP11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 NDUFB10O96000 172 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 ZNF844Q08AG5 666 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 BLMHQ13867 455 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 USH1GQ495M9 461 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 KLHDC7AQ5VTJ3 777 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 TBC1D1Q86TI0 1168 aaPredicted RBP11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 BORCS6Q96GS4 357 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 SWAP70Q9UH65 585 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 PALM3A6NDB9 673 aaPredicted RBP11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 DDAH1O94760 285 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 LINGO3P0C6S8 592 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 CAP2P40123 477 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 PMS1P54277 932 aaKnown RBP11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 SLC5A9Q2M3M2 681 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 FAM83BQ5T0W9 1011 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 SLFN13Q68D06 897 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 ADGRF4Q8IZF3 695 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 ADSSL1Q8N142 457 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 MTMR14Q8NCE2 650 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 CLMNQ96JQ2 1002 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 PANK4Q9NVE7 773 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 TSKSQ9UJT2 592 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 A0A1W2PQJ5 194 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 A6NHS1 94 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 SOCS7O14512 581 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 ALADP13716 330 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 KIF11P52732 1056 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 SPP2Q13103 211 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 ZNF268Q14587 947 aaPredicted RBP11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 GRM4Q14833 912 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 NPY5RQ15761 445 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 UAP1Q16222 522 aaPredicted RBP11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 PDCD2Q16342 344 aaPredicted RBP11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 ZC3H12AQ5D1E8 599 aaKnown RBP11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 DPY19L2Q6NUT2 758 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 CHMP6Q96FZ7 201 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 TUBGCP2Q9BSJ2 902 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 NUCKS1Q9H1E3 243 aaKnown RBP11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 TCP11L1Q9NUJ3 509 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 NOVA2Q9UNW9 492 aaKnown RBP11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 MYH10P35580 1976 aa11.03□□□□□ -0.64
HMGCLL1-205ENST00000398661 LCA5LO95447 670 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 BMP15O95972 392 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 NEFHP12036 1026 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 EPHX2P34913 555 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 CTNNA1P35221 906 aaKnown RBP11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 SLC30A9Q6PML9 568 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 TMEM179Q6ZVK1 233 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 ANKS4BQ8N8V4 417 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 TRIM47Q96LD4 638 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 KANSL2Q9H9L4 492 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 RRAGCQ9HB90 399 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 NMRK2Q9NPI5 230 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 TMEM260Q9NX78 707 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 ARHGAP20Q9P2F6 1191 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 SALL4Q9UJQ4 1053 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 NID2Q14112 1375 aa11.02□□□□□ -0.64
HMGCLL1-205ENST00000398661 GRID2IPA4D2P6 1211 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 PJA2O43164 708 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 RAD51CO43502 376 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 CAND2O75155 1236 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 SCG2P13521 617 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 EIF4A3P38919 411 aaKnown RBP11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 NLRP5P59047 1200 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 MTMR2Q13614 643 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 HLTFQ14527 1009 aaKnown RBP eCLIP11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 ZNF174Q15697 407 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 CWF19L1Q69YN2 538 aaKnown RBP11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 FAM83AQ86UY5 434 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 GJA10Q969M2 543 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 LRRC45Q96CN5 670 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 WNK4Q96J92 1243 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 ISCUQ9H1K1 167 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 KCNMB3Q9NPA1 279 aa11.02□□□□□ -0.65
HMGCLL1-205ENST00000398661 MYBP10242 640 aa11.01□□□□□ -0.65
HMGCLL1-205ENST00000398661 CCND1P24385 295 aa11.01□□□□□ -0.65
HMGCLL1-205ENST00000398661 HNRNPH3P31942 346 aaKnown RBP11.01□□□□□ -0.65
HMGCLL1-205ENST00000398661 KIF5BP33176 963 aa11.01□□□□□ -0.65
HMGCLL1-205ENST00000398661 MAGEA1P43355 309 aa11.01□□□□□ -0.65
HMGCLL1-205ENST00000398661 MAGOHP61326 146 aaKnown RBP11.01□□□□□ -0.65
HMGCLL1-205ENST00000398661 ZNF543Q08ER8 600 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms