RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 FBXW4P57775 412 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 GNGT1P63211 74 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 TBC1D22BQ9NU19 505 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 MYBP10242 640 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 AP1M1Q9BXS5 423 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 ZKSCAN8Q15776 578 aaPredicted RBP12.2□□□□□ -0.46
TTC28-201ENST00000397906 TXNP10599 105 aaKnown RBP12.2□□□□□ -0.46
TTC28-201ENST00000397906 NNMTP40261 264 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 RASSF2P50749 326 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 LRRC31Q6UY01 552 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 GCOM2Q9BZD3 368 aaPredicted RBP12.2□□□□□ -0.46
TTC28-201ENST00000397906 M0QYV0 167 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 TSNAXIP1Q2TAA8 658 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 MIPOL1Q8TD10 442 aa12.2□□□□□ -0.46
TTC28-201ENST00000397906 CLTCQ00610 1675 aaKnown RBP12.2□□□□□ -0.46
TTC28-201ENST00000397906 TMTC3Q6ZXV5 915 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 SDCCAG3Q96C92 435 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 FAM81BQ96LP2 452 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 SH2D3AQ9BRG2 576 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 SIK2Q9H0K1 926 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 IPO5O00410 1097 aaKnown RBP12.19□□□□□ -0.46
TTC28-201ENST00000397906 KIAA1755Q5JYT7 1200 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 LINC00301Q8NCQ3 95 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 NCAPD2Q15021 1401 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 PSMD14O00487 310 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 GNGT2O14610 69 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 TRIM67Q6ZTA4 783 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 DDX53Q86TM3 631 aaKnown RBP12.19□□□□□ -0.46
TTC28-201ENST00000397906 GSTA4O15217 222 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 ADCY10Q96PN6 1610 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 GRIK1P39086 918 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 SLC10A5Q5PT55 438 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 NDST4Q9H3R1 872 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 CEP152O94986 1710 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 TRIM68Q6AZZ1 485 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 NDUFAF2Q8N183 169 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 OXER1Q8TDS5 423 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 PPP1R13BQ96KQ4 1090 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 ZNRF3Q9ULT6 936 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 A0A1W2PQ27 194 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 A0A1W2PQ64 194 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 A0A1W2PQD8 194 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 TRIM49BA6NDI0 452 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 MXD4Q14582 209 aaPredicted RBP12.19□□□□□ -0.46
TTC28-201ENST00000397906 RUNDC3BQ96NL0 473 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 SLC7A5P2Q9GIP4 190 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 EPB41L5Q9HCM4 733 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 FAM217BQ9NTX9 383 aaPredicted RBP12.19□□□□□ -0.46
TTC28-201ENST00000397906 DAAM1Q9Y4D1 1078 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 QRICH2Q9H0J4 1663 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 WDR91A4D1P6 747 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 CC2D1AQ6P1N0 951 aaPredicted RBP12.19□□□□□ -0.46
TTC28-201ENST00000397906 MCPH1Q8NEM0 835 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 BAIAP2L1Q9UHR4 511 aa12.19□□□□□ -0.46
TTC28-201ENST00000397906 KDELC2Q7Z4H8 507 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 AFF4Q9UHB7 1163 aaKnown RBP12.18□□□□□ -0.46
TTC28-201ENST00000397906 GRIN3BO60391 1043 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 CD2BP2O95400 341 aaKnown RBP12.18□□□□□ -0.46
TTC28-201ENST00000397906 ESRRBO95718 433 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 STX1BP61266 288 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 DGKHQ86XP1 1220 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 FAF2Q96CS3 445 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 HEMGNQ9BXL5 484 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 ZFYVE28Q9HCC9 887 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 KLHL8Q9P2G9 620 aaPredicted RBP12.18□□□□□ -0.46
TTC28-201ENST00000397906 SUGT1Q9Y2Z0 365 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 HUNKP57058 714 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 LMNTD2Q8IXW0 634 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 RBM46Q8TBY0 533 aaKnown RBP12.18□□□□□ -0.46
TTC28-201ENST00000397906 SNAPC2Q13487 334 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 HVCN1Q96D96 273 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 GINM1Q9NU53 330 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 PLEKHG2Q9H7P9 1386 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 MYL1P05976 194 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 GNL1P36915 607 aaPredicted RBP12.18□□□□□ -0.46
TTC28-201ENST00000397906 COG7P83436 770 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 EZH2Q15910 746 aaKnown RBP12.18□□□□□ -0.46
TTC28-201ENST00000397906 THAP9Q9H5L6 903 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 SLC9A2Q9UBY0 812 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 GOLGA8MH3BSY2 632 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 DFFAO00273 331 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 MUM1Q2TAK8 710 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 QRICH1Q2TAL8 776 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 FAM84BQ96KN1 310 aaPredicted RBP12.18□□□□□ -0.46
TTC28-201ENST00000397906 UBE4BO95155 1302 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 CDR2Q01850 454 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 PGBD3Q8N328 593 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 PFKFB3Q16875 520 aaPredicted RBP12.18□□□□□ -0.46
TTC28-201ENST00000397906 TCP11X2Q5H9J9 407 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 CLEC10AQ8IUN9 316 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 SERPING1P05155 500 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 LCP1P13796 627 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 PPARGP37231 505 aaPredicted RBP12.18□□□□□ -0.46
TTC28-201ENST00000397906 LINC00116Q8NCU8 138 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 TBC1D16Q8TBP0 767 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 BCAP29Q9UHQ4 241 aa12.18□□□□□ -0.46
TTC28-201ENST00000397906 CPSF1Q10570 1443 aaKnown RBP12.17□□□□□ -0.46
TTC28-201ENST00000397906 KRT76Q01546 638 aa12.17□□□□□ -0.46
TTC28-201ENST00000397906 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
TTC28-201ENST00000397906 SART1O43290 800 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms