RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 U2AF2P26368 475 aaKnown RBP eCLIP16.67■□□□□ 0.262e-6■□□□□ 9.5
LSS-202ENST00000397728 ZNF699Q32M78 642 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 SMAP1Q8IYB5 467 aaPredicted RBP16.67■□□□□ 0.26
LSS-202ENST00000397728 RNF139Q8WU17 664 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 GCNAQ96QF7 691 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 MOV10L1Q9BXT6 1211 aaKnown RBP16.67■□□□□ 0.26
LSS-202ENST00000397728 KCNK3O14649 394 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 MAGEB2O15479 319 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 LONRF2Q1L5Z9 754 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 CHADLQ6NUI6 762 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 PDZD4Q76G19 769 aaPredicted RBP16.67■□□□□ 0.26
LSS-202ENST00000397728 PHLDB2Q86SQ0 1253 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 FBXO16Q8IX29 292 aaPredicted RBP16.67■□□□□ 0.26
LSS-202ENST00000397728 P2RX7Q99572 595 aaKnown RBP16.67■□□□□ 0.26
LSS-202ENST00000397728 RIT2Q99578 217 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 NFIBO00712 420 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 NMT1P30419 496 aaKnown RBP16.67■□□□□ 0.26
LSS-202ENST00000397728 LRRC71Q8N4P6 559 aa16.67■□□□□ 0.26
LSS-202ENST00000397728 UPF1Q92900 1129 aaKnown RBP eCLIP16.67■□□□□ 0.263e-17■■■■■ 38.2
LSS-202ENST00000397728 PPATQ06203 517 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 CFAP221Q4G0U5 840 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 SHC4Q6S5L8 630 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 C15orf52Q6ZUT6 534 aaKnown RBP16.66■□□□□ 0.26
LSS-202ENST00000397728 GMCL1P1Q8NEA9 526 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 GOLPH3LQ9H4A5 285 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 HPS5Q9UPZ3 1129 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 UTP11Q9Y3A2 253 aaKnown RBP16.66■□□□□ 0.26
LSS-202ENST00000397728 SLIT3O75094 1523 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 PRCPP42785 496 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 KIF2CQ99661 725 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 TYW1Q9NV66 732 aaKnown RBP16.66■□□□□ 0.26
LSS-202ENST00000397728 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.66■□□□□ 0.26
LSS-202ENST00000397728 TSKSQ9UJT2 592 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 GOLGA8FQ08AF8 430 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 GOLGA8DPQ0D2H9 430 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 MOB2Q70IA6 237 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 TRIM58Q8NG06 486 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 RSAD2Q8WXG1 361 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 FAM198AQ9UFP1 575 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 AGO2Q9UKV8 859 aaKnown RBP16.66■□□□□ 0.26
LSS-202ENST00000397728 NFAT5O94916 1531 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.66■□□□□ 0.26
LSS-202ENST00000397728 ESYT2A0FGR8 921 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 TCF7P36402 384 aaPredicted RBP16.66■□□□□ 0.26
LSS-202ENST00000397728 KAZNQ674X7 775 aa16.66■□□□□ 0.26
LSS-202ENST00000397728 UBLCP1Q8WVY7 318 aaPredicted RBP16.66■□□□□ 0.26
LSS-202ENST00000397728 ASCC2Q9H1I8 757 aaPredicted RBP16.66■□□□□ 0.26
LSS-202ENST00000397728 PPANQ9NQ55 473 aaKnown RBP16.66■□□□□ 0.26
LSS-202ENST00000397728 MXD4Q14582 209 aaPredicted RBP16.65■□□□□ 0.26
LSS-202ENST00000397728 ADAT2Q7Z6V5 191 aaKnown RBP16.65■□□□□ 0.26
LSS-202ENST00000397728 MAIP1Q8WWC4 291 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 KIF12Q96FN5 646 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 PDGFDQ9GZP0 370 aaPredicted RBP16.65■□□□□ 0.26
LSS-202ENST00000397728 ZMYND15Q9H091 742 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 SLC38A10Q9HBR0 1119 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 RBAKQ9NYW8 714 aaPredicted RBP16.65■□□□□ 0.26
LSS-202ENST00000397728 NPHP3-ACAD11A0A0J9YXS1 232 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 FDPSP14324 419 aaKnown RBP16.65■□□□□ 0.26
LSS-202ENST00000397728 NPEPPSP55786 919 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 TUBB4BP68371 445 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 DEFB115Q30KQ5 88 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 DNAJC24Q6P3W2 148 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 MAP7D3Q8IWC1 876 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 SEPT10Q9P0V9 454 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 ROBO1Q9Y6N7 1651 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 RPS6KA5O75582 802 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 PRR29P0C7W0 189 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 ATP1A3P13637 1013 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 DSG3P32926 999 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 EVCP57679 992 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 FMR1NBQ8N0W7 255 aaPredicted RBP16.65■□□□□ 0.26
LSS-202ENST00000397728 GPRASP2Q96D09 838 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 PLEKHA4Q9H4M7 779 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 VPS41P49754 854 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 TSPY1Q01534 308 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 SLC12A6Q9UHW9 1150 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 ADAMTSL3P82987 1691 aa16.65■□□□□ 0.26
LSS-202ENST00000397728 HBP1O60381 514 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 PTPRAP18433 802 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 RBL2Q08999 1139 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 CCSER1Q9C0I3 900 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 TMEM60Q9H2L4 133 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 ATN1P54259 1190 aaPredicted RBP16.64■□□□□ 0.25
LSS-202ENST00000397728 EMC2Q15006 297 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 KRT31Q15323 416 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 TCP11X2Q5H9J9 407 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 FBXO2Q9UK22 296 aaPredicted RBP16.64■□□□□ 0.25
LSS-202ENST00000397728 TRIM17Q9Y577 477 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 GLTPD2A6NH11 291 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 CIITAP33076 1130 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 CDC42EP1Q00587 391 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 GABPB2Q8TAK5 448 aaPredicted RBP16.64■□□□□ 0.25
LSS-202ENST00000397728 FEZ2Q9UHY8 353 aaPredicted RBP16.64■□□□□ 0.25
LSS-202ENST00000397728 IRF6O14896 467 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 PSMC4P43686 418 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 ACTR2P61160 394 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 EFCAB12Q6NXP0 572 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 CARD6Q9BX69 1037 aa16.64■□□□□ 0.25
LSS-202ENST00000397728 FOXN1O15353 648 aa16.63■□□□□ 0.25
LSS-202ENST00000397728 SEC23AQ15436 765 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms