RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 INPP5BP32019 993 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 SSTR3P32745 418 aaPredicted RBP11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 SPP2Q13103 211 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 TMEM132AQ24JP5 1023 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 RSBN1LQ6PCB5 846 aaPredicted RBP11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 KCTD10Q9H3F6 313 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 LARSQ9P2J5 1176 aaKnown RBP11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 HPCAL4Q9UM19 191 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 A0A1B0GUL6 1792 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 KRT14P02533 472 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 FECHP22830 423 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 TRAF1Q13077 416 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 SAMD7Q7Z3H4 446 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 ECM29Q5VYK3 1845 aa11.37□□□□□ -0.59
CPSF1P1-201ENST00000397477 PDXKO00764 312 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 EVI5O60447 810 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 ENTPD3O75355 529 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 MAP2K1Q02750 393 aaPredicted RBP11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 MESDQ14696 234 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 FOXR1Q6PIV2 292 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 CCDC25Q86WR0 208 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 MKL1Q969V6 931 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 VCPKMTQ9H867 229 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 OSGEPQ9NPF4 335 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 ACP6Q9NPH0 428 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 SSU72P8A0A1W2PR75 194 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 GLI1P08151 1106 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 CEP85LQ5SZL2 805 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 HGSNATQ68CP4 663 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 LMBRD2Q68DH5 695 aaPredicted RBP11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 PPP4R3CPQ6ZMV5 832 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 OTOP1Q7RTM1 612 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 HNRNPLLQ8WVV9 542 aaKnown RBP11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 EXOC4Q96A65 974 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 GMCL1Q96IK5 515 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 MAP2K7O14733 419 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 ATP2C2O75185 946 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 ACTN2P35609 894 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 GNGT1P63211 74 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 SEMA3FQ13275 785 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 MTMR1Q13613 665 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 TATDN1Q6P1N9 297 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 FRMD5Q7Z6J6 570 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 IL31RAQ8NI17 732 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 KCNH7Q9NS40 1196 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 TMOD4Q9NZQ9 345 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 HERC5Q9UII4 1024 aaKnown RBP11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 AMFRQ9UKV5 643 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 BTAF1O14981 1849 aa11.36□□□□□ -0.59
CPSF1P1-201ENST00000397477 ATMINO43313 823 aaPredicted RBP11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 PAK2Q13177 524 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 EDRF1Q3B7T1 1238 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 EEPD1Q7L9B9 569 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 OR2W6PQ8NHA6 318 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 RMDN3Q96TC7 470 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 MED4Q9NPJ6 270 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 AMACRQ9UHK6 382 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 EMSYQ7Z589 1322 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 OPA1O60313 960 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 ASNSP08243 561 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 GAP43P17677 238 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 GALCP54803 685 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 MTMR2Q13614 643 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 NAB2Q15742 525 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 SLC15A2Q16348 729 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 ZCWPW2Q504Y3 356 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 LMBR1Q8WVP7 490 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 FAM151AQ8WW52 585 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 CBWD1Q9BRT8 395 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 CELF4Q9BZC1 486 aaKnown RBP11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 NAGPAQ9UK23 515 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 ARAP2Q8WZ64 1704 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 SPOPO43791 374 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 FGGP02679 453 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 FAM153BP0C7A2 387 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 BIRC3Q13489 604 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 CCDC88AQ3V6T2 1871 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 FAM153CQ494X1 144 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 TAX1BP1Q86VP1 789 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 SLC35C1Q96A29 364 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 LENG9Q96B70 501 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 TAAR1Q96RJ0 339 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 PITPNM2Q9BZ72 1349 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 TSPYL1Q9H0U9 437 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 FAM153AQ9UHL3 310 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 AJAP1Q9UKB5 411 aaPredicted RBP11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 TMX2Q9Y320 296 aa11.35□□□□□ -0.59
CPSF1P1-201ENST00000397477 KLRG2A4D1S0 409 aaPredicted RBP11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 GRID2IPA4D2P6 1211 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 RAD51CO43502 376 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 CALCAP01258 141 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 CCT5P48643 541 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 FMO5P49326 533 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 PDCLQ13371 301 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 Q4G0T1 1027 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 CBWD6Q4V339 395 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 EPC2Q52LR7 807 aa11.34□□□□□ -0.59
CPSF1P1-201ENST00000397477 CBWD3Q5JTY5 395 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms