RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 STIM1Q13586 685 aa30.45■■■□□ 2.46
CPNE1-203ENST00000397442 GUF1Q8N442 669 aaKnown RBP30.45■■■□□ 2.46
CPNE1-203ENST00000397442 DHTKD1Q96HY7 919 aaPredicted RBP30.45■■■□□ 2.46
CPNE1-203ENST00000397442 GPRC5CQ9NQ84 441 aa30.45■■■□□ 2.46
CPNE1-203ENST00000397442 TSKSQ9UJT2 592 aa30.45■■■□□ 2.46
CPNE1-203ENST00000397442 SYNRGQ9UMZ2 1314 aa30.44■■■□□ 2.46
CPNE1-203ENST00000397442 GOLGA6L19H0YKK7 550 aa30.44■■■□□ 2.46
CPNE1-203ENST00000397442 PPP1R2P41236 205 aa30.44■■■□□ 2.46
CPNE1-203ENST00000397442 CASP5P51878 434 aa30.44■■■□□ 2.46
CPNE1-203ENST00000397442 MYCT1Q8N699 235 aa30.44■■■□□ 2.46
CPNE1-203ENST00000397442 DHX33Q9H6R0 707 aaKnown RBP30.44■■■□□ 2.46
CPNE1-203ENST00000397442 ERAP1Q9NZ08 941 aa30.44■■■□□ 2.46
CPNE1-203ENST00000397442 SEL1LQ9UBV2 794 aa30.44■■■□□ 2.46
CPNE1-203ENST00000397442 ZBTB42B2RXF5 422 aa30.43■■■□□ 2.46
CPNE1-203ENST00000397442 PSMA7O14818 248 aa30.43■■■□□ 2.46
CPNE1-203ENST00000397442 ZNF286BP0CG31 522 aa30.43■■■□□ 2.46
CPNE1-203ENST00000397442 PMS1P54277 932 aaKnown RBP30.43■■■□□ 2.46
CPNE1-203ENST00000397442 IRX5P78411 483 aaPredicted RBP30.43■■■□□ 2.46
CPNE1-203ENST00000397442 EPM2AIP1Q7L775 607 aaPredicted RBP30.43■■■□□ 2.46
CPNE1-203ENST00000397442 RNPEPQ9H4A4 650 aa30.43■■■□□ 2.46
CPNE1-203ENST00000397442 AP5Z1O43299 807 aa30.42■■■□□ 2.46
CPNE1-203ENST00000397442 ADCY3O60266 1144 aa30.42■■■□□ 2.46
CPNE1-203ENST00000397442 DGKDQ16760 1214 aa30.42■■■□□ 2.46
CPNE1-203ENST00000397442 ATP6V0A4Q9HBG4 840 aa30.42■■■□□ 2.46
CPNE1-203ENST00000397442 HTTP42858 3142 aa30.42■■■□□ 2.46
CPNE1-203ENST00000397442 SOX10P56693 466 aa30.42■■■□□ 2.46
CPNE1-203ENST00000397442 MYOCDQ8IZQ8 938 aa30.42■■■□□ 2.46
CPNE1-203ENST00000397442 MCPH1Q8NEM0 835 aa30.42■■■□□ 2.46
CPNE1-203ENST00000397442 SCFD1Q8WVM8 642 aa30.42■■■□□ 2.46
CPNE1-203ENST00000397442 DRC1Q96MC2 740 aa30.42■■■□□ 2.46
CPNE1-203ENST00000397442 FANCLQ9NW38 375 aa30.42■■■□□ 2.46
CPNE1-203ENST00000397442 NFE2L3Q9Y4A8 694 aa30.42■■■□□ 2.46
CPNE1-203ENST00000397442 TRIM49BA6NDI0 452 aa30.41■■■□□ 2.46
CPNE1-203ENST00000397442 DUSP11O75319 330 aaKnown RBP30.41■■■□□ 2.46
CPNE1-203ENST00000397442 EMC2Q15006 297 aa30.41■■■□□ 2.46
CPNE1-203ENST00000397442 ODR4Q5SWX8 454 aa30.41■■■□□ 2.46
CPNE1-203ENST00000397442 FAM102BQ5T8I3 360 aa30.41■■■□□ 2.46
CPNE1-203ENST00000397442 SPATA1Q5VX52 437 aa30.41■■■□□ 2.46
CPNE1-203ENST00000397442 SEMA6BQ9H3T3 888 aa30.41■■■□□ 2.46
CPNE1-203ENST00000397442 MRPL44Q9H9J2 332 aaKnown RBP30.41■■■□□ 2.46
CPNE1-203ENST00000397442 PPME1Q9Y570 386 aa30.41■■■□□ 2.46
CPNE1-203ENST00000397442 PLS3P13797 630 aa30.4■■■□□ 2.46
CPNE1-203ENST00000397442 CCNE1P24864 410 aa30.4■■■□□ 2.46
CPNE1-203ENST00000397442 POLGP54098 1239 aaPredicted RBP30.4■■■□□ 2.46
CPNE1-203ENST00000397442 CENPPQ6IPU0 288 aa30.4■■■□□ 2.46
CPNE1-203ENST00000397442 TTI2Q6NXR4 508 aa30.4■■■□□ 2.46
CPNE1-203ENST00000397442 PXYLP1Q8TE99 480 aa30.4■■■□□ 2.46
CPNE1-203ENST00000397442 P2RX5Q93086 422 aa30.4■■■□□ 2.46
CPNE1-203ENST00000397442 WBP1LQ9NX94 342 aa30.4■■■□□ 2.46
CPNE1-203ENST00000397442 H3BRB1 525 aa30.39■■■□□ 2.46
CPNE1-203ENST00000397442 SEPT4O43236 478 aa30.39■■■□□ 2.46
CPNE1-203ENST00000397442 HBP1O60381 514 aa30.39■■■□□ 2.46
CPNE1-203ENST00000397442 HMGCRP04035 888 aa30.39■■■□□ 2.46
CPNE1-203ENST00000397442 MYBP10242 640 aa30.39■■■□□ 2.46
CPNE1-203ENST00000397442 PRKAR2AP13861 404 aaKnown RBP30.39■■■□□ 2.46
CPNE1-203ENST00000397442 NMT1P30419 496 aaKnown RBP30.39■■■□□ 2.46
CPNE1-203ENST00000397442 RFC5P40937 340 aa30.39■■■□□ 2.46
CPNE1-203ENST00000397442 MAP3K21Q5TCX8 1036 aa30.39■■■□□ 2.46
CPNE1-203ENST00000397442 RAET1EQ8TD07 263 aa30.39■■■□□ 2.46
CPNE1-203ENST00000397442 BEGAINQ9BUH8 593 aa30.39■■■□□ 2.46
CPNE1-203ENST00000397442 TUT1Q9H6E5 874 aaKnown RBP30.39■■■□□ 2.46
CPNE1-203ENST00000397442 LARSQ9P2J5 1176 aaKnown RBP30.39■■■□□ 2.46
CPNE1-203ENST00000397442 CENPFP49454 3210 aa30.39■■■□□ 2.46
CPNE1-203ENST00000397442 ARHGEF6Q15052 776 aa30.39■■■□□ 2.45
CPNE1-203ENST00000397442 ZNF720Q7Z2F6 126 aa30.39■■■□□ 2.45
CPNE1-203ENST00000397442 FAM178BQ8IXR5 827 aa30.39■■■□□ 2.45
CPNE1-203ENST00000397442 KIFAP3Q92845 792 aa30.39■■■□□ 2.45
CPNE1-203ENST00000397442 AP5M1Q9H0R1 490 aa30.39■■■□□ 2.45
CPNE1-203ENST00000397442 TRPC6Q9Y210 931 aa30.39■■■□□ 2.45
CPNE1-203ENST00000397442 CEP350Q5VT06 3117 aa30.38■■■□□ 2.45
CPNE1-203ENST00000397442 MAFO75444 373 aaPredicted RBP30.38■■■□□ 2.45
CPNE1-203ENST00000397442 CCND3P30281 292 aaPredicted RBP30.38■■■□□ 2.45
CPNE1-203ENST00000397442 HOXD13P35453 343 aa30.38■■■□□ 2.45
CPNE1-203ENST00000397442 ANKRD40Q6AI12 368 aa30.38■■■□□ 2.45
CPNE1-203ENST00000397442 DNAJC5GQ8N7S2 189 aa30.38■■■□□ 2.45
CPNE1-203ENST00000397442 SLC7A3Q8WY07 619 aa30.38■■■□□ 2.45
CPNE1-203ENST00000397442 STRA6Q9BX79 667 aa30.38■■■□□ 2.45
CPNE1-203ENST00000397442 ZNF215Q9UL58 517 aaPredicted RBP30.38■■■□□ 2.45
CPNE1-203ENST00000397442 ZNF18P17022 549 aa30.37■■■□□ 2.45
CPNE1-203ENST00000397442 CPT1AP50416 773 aa30.37■■■□□ 2.45
CPNE1-203ENST00000397442 BMT2Q1RMZ1 405 aa30.37■■■□□ 2.45
CPNE1-203ENST00000397442 BSNDQ8WZ55 320 aa30.37■■■□□ 2.45
CPNE1-203ENST00000397442 DUSP9Q99956 384 aaKnown RBP30.37■■■□□ 2.45
CPNE1-203ENST00000397442 SAMSN1Q9NSI8 373 aaKnown RBP30.37■■■□□ 2.45
CPNE1-203ENST00000397442 PPP1R37O75864 691 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 GCNT3O95395 438 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 MAPTP10636 758 aaKnown RBP30.36■■■□□ 2.45
CPNE1-203ENST00000397442 CNGA1P29973 690 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 PRMT2P55345 433 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 RTP1P59025 263 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 BEX3Q00994 111 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 ZNF507Q8TCN5 953 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 KCTD10Q9H3F6 313 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 IGKV6-21A0A0C4DH24 114 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 F2P00734 622 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 ATP1A3P13637 1013 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 INSRRP14616 1297 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 GJA9P57773 515 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 TBC1D8BQ0IIM8 1120 aa30.36■■■□□ 2.45
CPNE1-203ENST00000397442 FSCN1Q16658 493 aaKnown RBP30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms