RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 MRE11P49959 708 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 SLC26A2P50443 739 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 NHLH1Q02575 133 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 COASYQ13057 564 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 PLCB4Q15147 1175 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 CLUL1Q15846 466 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 PKN1Q16512 942 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 ODR4Q5SWX8 454 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 HFE2Q6ZVN8 426 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 CMTR1Q8N1G2 835 aaKnown RBP10□□□□□ -0.81
CAPN3-208ENST00000397204 EFHBQ8N7U6 833 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 KLHL23Q8NBE8 558 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 LINC01599Q8WXQ3 324 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 SDF4Q9BRK5 362 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 FAM49AQ9H0Q0 323 aaPredicted RBP10□□□□□ -0.81
CAPN3-208ENST00000397204 LRFN2Q9ULH4 789 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 TRPV2Q9Y5S1 764 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 SLC12A7Q9Y666 1083 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 MRPL42Q9Y6G3 142 aaKnown RBP10□□□□□ -0.81
CAPN3-208ENST00000397204 NFASCO94856 1347 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 IGSF9BQ9UPX0 1349 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 KDM3AQ9Y4C1 1321 aa10□□□□□ -0.81
CAPN3-208ENST00000397204 ZFHX2Q9C0A1 2572 aaPredicted RBP10□□□□□ -0.81
CAPN3-208ENST00000397204 MEIS1O00470 390 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 LINC01565O15544 149 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 TBX10O75333 385 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 DNAJB1P25685 340 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 NDUFV1P49821 464 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 ACTR2P61160 394 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 KRT76Q01546 638 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 UBE3AQ05086 875 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 PAK2Q13177 524 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 UBE2SQ16763 222 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 CEP55Q53EZ4 464 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 MTHFD1LQ6UB35 978 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 SYNE3Q6ZMZ3 975 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 CCDC82Q8N4S0 544 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 POF1BQ8WVV4 589 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 AAASQ9NRG9 546 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 PKD2L1Q9P0L9 805 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 CLEC1BQ9P126 229 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 MUTYHQ9UIF7 546 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 PCDHB7Q9Y5E2 793 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 PCDHB12Q9Y5F1 795 aa9.99□□□□□ -0.81
CAPN3-208ENST00000397204 IGKV6D-21A0A0A0MT36 114 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 hCG_1642624A0A1W2PR95 340 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 FSD2A1L4K1 749 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 LOC730098B7Z3J9 87 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 HBP1O60381 514 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 KLRC1P26715 233 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 NRIP1P48552 1158 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 SARSP49591 514 aaKnown RBP9.98□□□□□ -0.81
CAPN3-208ENST00000397204 TMEM62Q0P6H9 643 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 NFX1Q12986 1120 aaKnown RBP9.98□□□□□ -0.81
CAPN3-208ENST00000397204 CBX2Q14781 532 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-208ENST00000397204 PDE12Q6L8Q7 609 aaKnown RBP9.98□□□□□ -0.81
CAPN3-208ENST00000397204 TRIM67Q6ZTA4 783 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 TMTC3Q6ZXV5 915 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 HEATR3Q7Z4Q2 680 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 SGMS1Q86VZ5 419 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 SMRP1Q8NCR6 262 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 CYP2W1Q8TAV3 490 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 MICAL1Q8TDZ2 1067 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 ZBTB10Q96DT7 871 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 PRRX2Q99811 253 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 GLT8D2Q9H1C3 349 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 TMX1Q9H3N1 280 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 TLE6Q9H808 572 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 RIC8AQ9NPQ8 531 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 ZNF318Q5VUA4 2279 aa9.98□□□□□ -0.81
CAPN3-208ENST00000397204 PTPRZ1P23471 2315 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-208ENST00000397204 TECTAO75443 2155 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 SLC27A2O14975 620 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 GPR182O15218 404 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 PPFIA3O75145 1194 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 RPS6KA5O75582 802 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 ARP10275 920 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 RXRAP19793 462 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 FAM189BP81408 668 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 NECTIN1Q15223 517 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 PAN2Q504Q3 1202 aaKnown RBP9.97□□□□□ -0.81
CAPN3-208ENST00000397204 ZNF484Q5JVG2 852 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 FAM160B1Q5W0V3 765 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 PPP1R18Q6NYC8 613 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 ABHD15Q6UXT9 468 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 SLC24A5Q71RS6 500 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 NIPA1Q7RTP0 329 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 ADGRD2Q7Z7M1 963 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 RBM23Q86U06 439 aaKnown RBP9.97□□□□□ -0.81
CAPN3-208ENST00000397204 KIAA0319LQ8IZA0 1049 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 TRAPPC12Q8WVT3 735 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 PBXIP1Q96AQ6 731 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 CDCA3Q99618 268 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-208ENST00000397204 ADAM2Q99965 735 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 PHF7Q9BWX1 381 aaPredicted RBP9.97□□□□□ -0.81
CAPN3-208ENST00000397204 LSG1Q9H089 658 aaKnown RBP9.97□□□□□ -0.81
CAPN3-208ENST00000397204 AGO4Q9HCK5 861 aaKnown RBP9.97□□□□□ -0.81
CAPN3-208ENST00000397204 RGS18Q9NS28 235 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 C1orf112Q9NSG2 853 aa9.97□□□□□ -0.81
CAPN3-208ENST00000397204 V9GY48 417 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms