RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 TRIM68Q6AZZ1 485 aa9.96□□□□□ -0.82
CAPN3-206ENST00000397163 SPICE1Q8N0Z3 855 aa9.96□□□□□ -0.82
CAPN3-206ENST00000397163 AGAP11Q8TF27 550 aa9.96□□□□□ -0.82
CAPN3-206ENST00000397163 SCFD1Q8WVM8 642 aa9.96□□□□□ -0.82
CAPN3-206ENST00000397163 KDM4CQ9H3R0 1056 aa9.96□□□□□ -0.82
CAPN3-206ENST00000397163 DDX25Q9UHL0 483 aaKnown RBP9.96□□□□□ -0.82
CAPN3-206ENST00000397163 KIAA1024Q9UPX6 916 aa9.96□□□□□ -0.82
CAPN3-206ENST00000397163 C15orf41Q9Y2V0 281 aa9.96□□□□□ -0.82
CAPN3-206ENST00000397163 CCT8L1PA6NM43 557 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 MGRN1O60291 552 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 ONECUT3O60422 494 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-206ENST00000397163 FGGP02679 453 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 CDK8P49336 464 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 EIF3BP55884 814 aaKnown RBP9.95□□□□□ -0.82
CAPN3-206ENST00000397163 MARSP56192 900 aaKnown RBP9.95□□□□□ -0.82
CAPN3-206ENST00000397163 ADAT2Q7Z6V5 191 aaKnown RBP9.95□□□□□ -0.82
CAPN3-206ENST00000397163 SYCE1Q8N0S2 351 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 MAGEC3Q8TD91 643 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 U2AF1L4Q8WU68 220 aaKnown RBP9.95□□□□□ -0.82
CAPN3-206ENST00000397163 FAM129AQ9BZQ8 928 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 SUCLA2Q9P2R7 463 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-206ENST00000397163 RGS17Q9UGC6 210 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-206ENST00000397163 ARMCX3Q9UH62 379 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-206ENST00000397163 PCDHA12Q9UN75 941 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 F8W031 263 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-206ENST00000397163 DNAJC8O75937 253 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-206ENST00000397163 MMEP08473 750 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 PLA2G4BP0C869 781 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 GHRP10912 638 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 UBE2SQ16763 222 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 ERMARDQ5T6L9 678 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 CEP95Q96GE4 821 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 ANKRD2Q9GZV1 360 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 RAB17Q9H0T7 212 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 AMFRQ9UKV5 643 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 THSD7AQ9UPZ6 1657 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 FAM170AA1A519 330 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 AFPP02771 609 aaKnown RBP9.95□□□□□ -0.82
CAPN3-206ENST00000397163 PYGLP06737 847 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 CHN1P15882 459 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 SLC8A3P57103 927 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 RBBP5Q15291 538 aaKnown RBP9.95□□□□□ -0.82
CAPN3-206ENST00000397163 NBPF9Q3BBW0 867 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 MIS18BP1Q6P0N0 1132 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 TAX1BP1Q86VP1 789 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 SEPT12Q8IYM1 358 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 CCDC24Q8N4L8 307 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 CCDC63Q8NA47 563 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 NT5C3AQ9H0P0 336 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 KCTD10Q9H3F6 313 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 STK38LQ9Y2H1 464 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 MYH1P12882 1939 aa9.95□□□□□ -0.82
CAPN3-206ENST00000397163 ITGB4P16144 1822 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 SPDYE3A6NKU9 549 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 BHMG1C9JSJ3 638 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-206ENST00000397163 MAP3K13O43283 966 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 EDIL3O43854 480 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 POTEAQ6S8J7 498 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 RASGEF1CQ8N431 466 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 NEDD1Q8NHV4 660 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 TLCD1Q96CP7 247 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 ARHGEF10LQ9HCE6 1279 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 ROBO3Q96MS0 1386 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 POTEB3A0JP26 581 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 POTECB2RU33 542 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 SMNDC1O75940 238 aaKnown RBP eCLIP9.94□□□□□ -0.82
CAPN3-206ENST00000397163 SHBGP04278 402 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 VIMP08670 466 aaKnown RBP9.94□□□□□ -0.82
CAPN3-206ENST00000397163 XRCC5P13010 732 aaKnown RBP9.94□□□□□ -0.82
CAPN3-206ENST00000397163 PON1P27169 355 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 GSTO1P78417 241 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 POTEBQ6S5H4 581 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 NT5DC3Q86UY8 548 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 KIF2BQ8N4N8 673 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 MAB21L3Q8N8X9 362 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 RBM46Q8TBY0 533 aaKnown RBP9.94□□□□□ -0.82
CAPN3-206ENST00000397163 HOOK2Q96ED9 719 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 GPCPD1Q9NPB8 672 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.94□□□□□ -0.82
CAPN3-206ENST00000397163 SAMD15Q9P1V8 674 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 KDM3AQ9Y4C1 1321 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 PPIP5K2O43314 1243 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 PPFIA2O75334 1257 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 SMARCA1P28370 1054 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 COPB2P35606 906 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 RAB27AP51159 221 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 PLTPP55058 493 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 KCNJ2P63252 427 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 EDRF1Q3B7T1 1238 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 DENND2CQ68D51 928 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 PPP4R3CPQ6ZMV5 832 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 SLFN11Q7Z7L1 901 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 WDR66Q8TBY9 1149 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 NEK9Q8TD19 979 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 HAS1Q92839 578 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 STXBP5LQ9Y2K9 1186 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 NR2E1Q9Y466 385 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 PCDHA2Q9Y5H9 948 aa9.94□□□□□ -0.82
CAPN3-206ENST00000397163 GOLGA6L10A0A0M3HER8 536 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 RGS16O15492 202 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms