RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 IQANK1A0A1B0GTG1 560 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 WDR91A4D1P6 747 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 NBPF26B4DH59 902 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 PRRG1O14668 218 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 STAT3P40763 770 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 CRKP46108 304 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 MFN1Q8IWA4 741 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 SPATA33Q96N06 139 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 LRRC37BQ96QE4 947 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 ASNSD1Q9NWL6 643 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 PPP2R2CQ9Y2T4 447 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 TRAPPC8Q9Y2L5 1435 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 A8MXQ7 604 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 CYP2E1P05181 493 aaPredicted RBP7.69□□□□□ -1.18
UPF2-203ENST00000397053 EEF1DP29692 281 aaKnown RBP7.69□□□□□ -1.18
UPF2-203ENST00000397053 PDIA3P30101 505 aaKnown RBP7.69□□□□□ -1.18
UPF2-203ENST00000397053 CDC25AP30304 524 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 MORF4L2Q15014 288 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 RNF168Q8IYW5 571 aaPredicted RBP7.69□□□□□ -1.18
UPF2-203ENST00000397053 CCNYL1Q8N7R7 359 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 APPL2Q8NEU8 664 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 CAPS2Q9BXY5 557 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 OLFML3Q9NRN5 406 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 BFARQ9NZS9 450 aa7.69□□□□□ -1.18
UPF2-203ENST00000397053 TSR3Q9UJK0 312 aaKnown RBP7.69□□□□□ -1.18
UPF2-203ENST00000397053 GADD45BO75293 160 aaPredicted RBP7.68□□□□□ -1.18
UPF2-203ENST00000397053 TADA2AO75478 443 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 CIAO1O76071 339 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 CCT5P48643 541 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 RBM6P78332 1123 aaKnown RBP7.68□□□□□ -1.18
UPF2-203ENST00000397053 CCDC15Q0P6D6 951 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 SEPT2Q15019 361 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 EFHC2Q5JST6 749 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 CHMP1BQ7LBR1 199 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 OTULINQ96BN8 352 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 RUBCNLQ9H714 662 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 GTSE1Q9NYZ3 720 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 CASP14P31944 242 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 ETF1P62495 437 aaKnown RBP7.68□□□□□ -1.18
UPF2-203ENST00000397053 PTH1RQ03431 593 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 ANO4Q32M45 955 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 TJAP1Q5JTD0 557 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 KCTD16Q68DU8 428 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 WDR75Q8IWA0 830 aaKnown RBP7.68□□□□□ -1.18
UPF2-203ENST00000397053 SYNE4Q8N205 404 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 PHF21AQ96BD5 680 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 OPTNQ96CV9 577 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 NAF1Q96HR8 494 aaKnown RBP7.68□□□□□ -1.18
UPF2-203ENST00000397053 ZNF560Q96MR9 790 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 GPR101Q96P66 508 aaPredicted RBP7.68□□□□□ -1.18
UPF2-203ENST00000397053 ACAD9Q9H845 621 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 ZNF302Q9NR11 478 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 PRKAB2O43741 272 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 RPS6KA4O75676 772 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 KRT38O76015 456 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 ZRANB2O95218 330 aaKnown RBP eCLIP7.68□□□□□ -1.18
UPF2-203ENST00000397053 SLCO1A2P46721 670 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 RWDD2BP57060 319 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 AP3B2Q13367 1082 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 C8orf34Q49A92 452 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 TTC39CQ8N584 583 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 FBXO41Q8TF61 875 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 VPS11Q9H270 941 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 PCDHB8Q9UN66 801 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 TJP3O95049 919 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 PYGBP11216 843 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 KCNA2P16389 499 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 GPC3P51654 580 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 OOSP2Q86WS3 158 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 C17orf53Q8N3J3 647 aaPredicted RBP7.68□□□□□ -1.18
UPF2-203ENST00000397053 STX19Q8N4C7 294 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 TTC13Q8NBP0 860 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 CCDC197Q8NCU1 140 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 PIGOQ8TEQ8 1089 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 TRIM15Q9C019 465 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 KDM4CQ9H3R0 1056 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 ZFYVE28Q9HCC9 887 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 GPR108Q9NPR9 543 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 FEM1BQ9UK73 627 aa7.68□□□□□ -1.18
UPF2-203ENST00000397053 NUP160Q12769 1436 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 SFI1A8K8P3 1242 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 ERVV-1B6SEH8 477 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 CTSHP09668 335 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 HIST1H2AGP0C0S8 130 aaPredicted RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 RARBP10826 455 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 HIST1H2ADP20671 130 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 DHX9Q08211 1270 aaKnown RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 FLOT2Q14254 428 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 NLRP10Q86W26 655 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 XXYLT1Q8NBI6 393 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 MAML1Q92585 1016 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 MTBPQ96DY7 904 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 BTBD6Q96KE9 485 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 HIST1H2AHQ96KK5 128 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 ZNF512Q96ME7 567 aaPredicted RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 HIST1H2AJQ99878 128 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 H2AFJQ9BTM1 129 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 SYTL2Q9HCH5 934 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 UBE4BO95155 1302 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 KPNA7A9QM74 516 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms