RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ANKRD20A1Q5TYW2 823 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 DRC3Q9H069 523 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 PDXKO00764 312 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 ATP2C1P98194 919 aaPredicted RBP16.8■□□□□ 0.28
GNE-202ENST00000396594 OR6B2Q6IFH4 312 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 TRIM15Q9C019 465 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 ZNF212Q9UDV6 495 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 IP6K2Q9UHH9 426 aa16.8■□□□□ 0.28
GNE-202ENST00000396594 P4HA2O15460 535 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 HIP1RO75146 1068 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 NR3C1P04150 777 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 SLC1A1P43005 524 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 DPCR1Q3MIW9 517 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 LRRC31Q6UY01 552 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 TTLL3Q9Y4R7 772 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 PCDHB6Q9Y5E3 794 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 PPP2R3BQ9Y5P8 575 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 GPC5P78333 572 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 DIXDC1Q155Q3 683 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 ENAHQ8N8S7 591 aaPredicted RBP16.79■□□□□ 0.28
GNE-202ENST00000396594 FAM149B1Q96BN6 582 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 FAM129AQ9BZQ8 928 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 ACTR5Q9H9F9 607 aaPredicted RBP16.79■□□□□ 0.28
GNE-202ENST00000396594 FAM187AA6NFU0 413 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 HMGB3O15347 200 aaKnown RBP16.79■□□□□ 0.28
GNE-202ENST00000396594 SLC16A2P36021 539 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 GNGT1P63211 74 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 MXD4Q14582 209 aaPredicted RBP16.79■□□□□ 0.28
GNE-202ENST00000396594 KLHL38Q2WGJ6 581 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 DARS2Q6PI48 645 aaKnown RBP16.79■□□□□ 0.28
GNE-202ENST00000396594 SESTD1Q86VW0 696 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 AGBL3Q8NEM8 1001 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 CHST13Q8NET6 341 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 DYNLL2Q96FJ2 89 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 SERPINA10Q9UK55 444 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 SLIT1O75093 1534 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 TOB2Q14106 344 aaPredicted RBP16.79■□□□□ 0.28
GNE-202ENST00000396594 E2F5Q15329 346 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 NUDT18Q6ZVK8 323 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 CCDC197Q8NCU1 140 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 CCDC124Q96CT7 223 aaKnown RBP16.79■□□□□ 0.28
GNE-202ENST00000396594 BHMT2Q9H2M3 363 aa16.79■□□□□ 0.28
GNE-202ENST00000396594 POLR1AO95602 1720 aaPredicted RBP16.79■□□□□ 0.28
GNE-202ENST00000396594 ILF2Q12905 390 aaKnown RBP16.78■□□□□ 0.28
GNE-202ENST00000396594 SNRNP48Q6IEG0 339 aaKnown RBP16.78■□□□□ 0.28
GNE-202ENST00000396594 SLC35F6Q8N357 371 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 TXLNGQ9NUQ3 528 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 ZNF827Q17R98 1081 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 HSP90AA5PQ58FG0 334 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 C4orf22Q6V702 233 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 PGBD4Q96DM1 585 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 WNT8AQ9H1J5 351 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 INTS9Q9NV88 658 aaKnown RBP16.78■□□□□ 0.28
GNE-202ENST00000396594 ZBED1O96006 694 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 FAM83BQ5T0W9 1011 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 ALKBH5Q6P6C2 394 aaKnown RBP16.78■□□□□ 0.28
GNE-202ENST00000396594 WRNIP1Q96S55 665 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 PARK7Q99497 189 aaKnown RBP16.78■□□□□ 0.28
GNE-202ENST00000396594 SEPT10Q9P0V9 454 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 PCDHA10Q9Y5I2 948 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 ATP5HO75947 161 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 KRT37O76014 449 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 EIF2AK2P19525 551 aaKnown RBP16.78■□□□□ 0.28
GNE-202ENST00000396594 GUCY2DQ02846 1103 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 TTBK2Q6IQ55 1244 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 CDKL3Q8IVW4 592 aaPredicted RBP16.78■□□□□ 0.28
GNE-202ENST00000396594 CERKQ8TCT0 537 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 FBXO41Q8TF61 875 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 SERPINI1Q99574 410 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 FOXP3Q9BZS1 431 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 DIP2BQ9P265 1576 aa16.78■□□□□ 0.28
GNE-202ENST00000396594 EIF4A3P38919 411 aaKnown RBP16.77■□□□□ 0.28
GNE-202ENST00000396594 DEUP1Q05D60 604 aa16.77■□□□□ 0.28
GNE-202ENST00000396594 NR5A1Q13285 461 aa16.77■□□□□ 0.28
GNE-202ENST00000396594 IQCB1Q15051 598 aa16.77■□□□□ 0.28
GNE-202ENST00000396594 TAF1BQ53T94 588 aaPredicted RBP16.77■□□□□ 0.28
GNE-202ENST00000396594 TBC1D10CQ8IV04 446 aa16.77■□□□□ 0.28
GNE-202ENST00000396594 LRGUKQ96M69 825 aa16.77■□□□□ 0.28
GNE-202ENST00000396594 HEXIM2Q96MH2 286 aaKnown RBP16.77■□□□□ 0.28
GNE-202ENST00000396594 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.77■□□□□ 0.28
GNE-202ENST00000396594 MAD1L1Q9Y6D9 718 aa16.77■□□□□ 0.28
GNE-202ENST00000396594 ZHX2Q9Y6X8 837 aa16.77■□□□□ 0.28
GNE-202ENST00000396594 TRAPPC3O43617 180 aa16.77■□□□□ 0.28
GNE-202ENST00000396594 ARL4CP56559 192 aa16.77■□□□□ 0.28
GNE-202ENST00000396594 KRT31Q15323 416 aa16.77■□□□□ 0.28
GNE-202ENST00000396594 PREX1Q8TCU6 1659 aa16.77■□□□□ 0.28
GNE-202ENST00000396594 C21orf2O43822 256 aa16.77■□□□□ 0.28
GNE-202ENST00000396594 GPSM2P81274 684 aa16.77■□□□□ 0.27
GNE-202ENST00000396594 GPD1LQ8N335 351 aa16.77■□□□□ 0.27
GNE-202ENST00000396594 PPP2R3CQ969Q6 453 aa16.77■□□□□ 0.27
GNE-202ENST00000396594 FAM84BQ96KN1 310 aaPredicted RBP16.77■□□□□ 0.27
GNE-202ENST00000396594 TNIP3Q96KP6 325 aa16.77■□□□□ 0.27
GNE-202ENST00000396594 C17orf75Q9HAS0 396 aa16.77■□□□□ 0.27
GNE-202ENST00000396594 SPON1Q9HCB6 807 aa16.77■□□□□ 0.27
GNE-202ENST00000396594 NEDD4P46934 1319 aa16.77■□□□□ 0.27
GNE-202ENST00000396594 CARNS1A5YM72 827 aa16.76■□□□□ 0.27
GNE-202ENST00000396594 SPDYE16A6NNV3 312 aaPredicted RBP16.76■□□□□ 0.27
GNE-202ENST00000396594 DGAT1O75907 488 aa16.76■□□□□ 0.27
GNE-202ENST00000396594 MT-ND3P03897 115 aa16.76■□□□□ 0.27
GNE-202ENST00000396594 SPDYE2Q495Y8 402 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms