RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 U2AF1L4Q8WU68 220 aaKnown RBP17.11■□□□□ 0.33
HOXA3-202ENST00000396352 LMBR1Q8WVP7 490 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 AMNQ9BXJ7 453 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 SLITRK6Q9H5Y7 841 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 MYO1FO00160 1098 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 EML1O00423 815 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 OPLAHO14841 1288 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 HPDP32754 393 aaPredicted RBP17.11■□□□□ 0.33
HOXA3-202ENST00000396352 CIITAP33076 1130 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 CTNNA1P35221 906 aaKnown RBP17.11■□□□□ 0.33
HOXA3-202ENST00000396352 MMP14P50281 582 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 HDLBPQ00341 1268 aaKnown RBP17.11■□□□□ 0.33
HOXA3-202ENST00000396352 CYP2W1Q8TAV3 490 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 TEKT1Q969V4 418 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 POLR3CQ9BUI4 534 aaPredicted RBP17.11■□□□□ 0.33
HOXA3-202ENST00000396352 SLC12A6Q9UHW9 1150 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 PCDHB13Q9Y5F0 798 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 GOLGA6L10A6NI86 522 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 DAPK3O43293 454 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 EVI5O60447 810 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 EYA4O95677 639 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 FERP16591 822 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 GALCP54803 685 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 USH1GQ495M9 461 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 FBXW10Q5XX13 1052 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 SYCE1Q8N0S2 351 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 EIF2AK1Q9BQI3 630 aaKnown RBP17.11■□□□□ 0.33
HOXA3-202ENST00000396352 OSGEPQ9NPF4 335 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 RABGAP1Q9Y3P9 1069 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 NCANO14594 1321 aa17.11■□□□□ 0.33
HOXA3-202ENST00000396352 F8VZ95 297 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 POLRMTO00411 1230 aaKnown RBP17.1■□□□□ 0.33
HOXA3-202ENST00000396352 TTI1O43156 1089 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 TBCAO75347 108 aaKnown RBP17.1■□□□□ 0.33
HOXA3-202ENST00000396352 FAM107AO95990 144 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 FNTAP49354 379 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 POU5F1Q01860 360 aaKnown RBP17.1■□□□□ 0.33
HOXA3-202ENST00000396352 DOK7Q18PE1 504 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 MCTP2Q6DN12 878 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 YTHDF3Q7Z739 585 aaKnown RBP17.1■□□□□ 0.33
HOXA3-202ENST00000396352 SYT11Q9BT88 431 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 RGL1Q9NZL6 768 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 STK24Q9Y6E0 443 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 EP400Q96L91 3159 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 SMCHD1A6NHR9 2005 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 DDTLA6NHG4 134 aaPredicted RBP17.1■□□□□ 0.33
HOXA3-202ENST00000396352 SPDYE3A6NKU9 549 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 CACNB3P54284 484 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 RINT1Q6NUQ1 792 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 KCNV1Q6PIU1 500 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 TMC3Q7Z5M5 1100 aa17.1■□□□□ 0.33
HOXA3-202ENST00000396352 SFI1A8K8P3 1242 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 CERKLQ49MI3 558 aaPredicted RBP17.09■□□□□ 0.33
HOXA3-202ENST00000396352 DCAF12L1Q5VU92 463 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 CNPY4Q8N129 248 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 CELF4Q9BZC1 486 aaKnown RBP17.09■□□□□ 0.33
HOXA3-202ENST00000396352 GPR88Q9GZN0 384 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 CENPHQ9H3R5 247 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 TTC7AQ9ULT0 858 aaPredicted RBP17.09■□□□□ 0.33
HOXA3-202ENST00000396352 PCDHAC2Q9Y5I4 1007 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 IGSF9BQ9UPX0 1349 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 BUB1BO60566 1050 aaPredicted RBP17.09■□□□□ 0.33
HOXA3-202ENST00000396352 FSBPO95073 299 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 STAT1P42224 750 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 FBXO11Q86XK2 927 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 ZC3H12CQ9C0D7 883 aaKnown RBP17.09■□□□□ 0.33
HOXA3-202ENST00000396352 EIF3DO15371 548 aaKnown RBP eCLIP17.09■□□□□ 0.33
HOXA3-202ENST00000396352 FOSP01100 380 aaPredicted RBP17.09■□□□□ 0.33
HOXA3-202ENST00000396352 SOX5P35711 763 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 BIRC3Q13489 604 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 GLYCTKQ8IVS8 523 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 FAM186BQ8IYM0 893 aa17.09■□□□□ 0.33
HOXA3-202ENST00000396352 PRPF38AQ8NAV1 312 aaKnown RBP17.09■□□□□ 0.33
HOXA3-202ENST00000396352 E7EVH7 732 aa17.08■□□□□ 0.33
HOXA3-202ENST00000396352 DDX3YO15523 660 aaKnown RBP17.08■□□□□ 0.33
HOXA3-202ENST00000396352 KIAA0754O94854 1291 aa17.08■□□□□ 0.33
HOXA3-202ENST00000396352 GAP43P17677 238 aa17.08■□□□□ 0.33
HOXA3-202ENST00000396352 NMT1P30419 496 aaKnown RBP17.08■□□□□ 0.33
HOXA3-202ENST00000396352 HOXA13P31271 388 aaPredicted RBP17.08■□□□□ 0.33
HOXA3-202ENST00000396352 CRKP46108 304 aa17.08■□□□□ 0.33
HOXA3-202ENST00000396352 TCP10Q12799 353 aa17.08■□□□□ 0.33
HOXA3-202ENST00000396352 SLC15A2Q16348 729 aa17.08■□□□□ 0.33
HOXA3-202ENST00000396352 NFIL3Q16649 462 aa17.08■□□□□ 0.33
HOXA3-202ENST00000396352 SH3BP5LQ7L8J4 393 aa17.08■□□□□ 0.33
HOXA3-202ENST00000396352 ARFGAP2Q8N6H7 521 aa17.08■□□□□ 0.33
HOXA3-202ENST00000396352 OTUD6BQ8N6M0 293 aa17.08■□□□□ 0.33
HOXA3-202ENST00000396352 SLC35G2Q8TBE7 412 aa17.08■□□□□ 0.33
HOXA3-202ENST00000396352 UBLCP1Q8WVY7 318 aaPredicted RBP17.08■□□□□ 0.33
HOXA3-202ENST00000396352 NR2E1Q9Y466 385 aa17.08■□□□□ 0.33
HOXA3-202ENST00000396352 IGLV3-22A0A075B6J6 115 aa17.08■□□□□ 0.32
HOXA3-202ENST00000396352 F5H6K3 240 aa17.08■□□□□ 0.32
HOXA3-202ENST00000396352 PPATQ06203 517 aa17.08■□□□□ 0.32
HOXA3-202ENST00000396352 KLRC3Q07444 240 aa17.08■□□□□ 0.32
HOXA3-202ENST00000396352 MTMR3Q13615 1198 aa17.08■□□□□ 0.32
HOXA3-202ENST00000396352 ZC2HC1CQ53FD0 456 aaPredicted RBP17.08■□□□□ 0.32
HOXA3-202ENST00000396352 PIGOQ8TEQ8 1089 aa17.08■□□□□ 0.32
HOXA3-202ENST00000396352 LRRC4CQ9HCJ2 640 aa17.08■□□□□ 0.32
HOXA3-202ENST00000396352 GGA2Q9UJY4 613 aa17.08■□□□□ 0.32
HOXA3-202ENST00000396352 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.32
HOXA3-202ENST00000396352 PSMC2P35998 433 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms