RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 FOXD4L6Q3SYB3 417 aaPredicted RBP18.49■□□□□ 0.55
CXCL1-201ENST00000395761 IER5Q5VY09 327 aa18.49■□□□□ 0.55
CXCL1-201ENST00000395761 FOXD4L3Q6VB84 417 aaPredicted RBP18.49■□□□□ 0.55
CXCL1-201ENST00000395761 CELF4Q9BZC1 486 aaKnown RBP18.49■□□□□ 0.55
CXCL1-201ENST00000395761 RAB34Q9BZG1 259 aa18.49■□□□□ 0.55
CXCL1-201ENST00000395761 BMP2KQ9NSY1 1161 aaPredicted RBP18.49■□□□□ 0.55
CXCL1-201ENST00000395761 ANKEF1Q9NU02 776 aa18.49■□□□□ 0.55
CXCL1-201ENST00000395761 TFIP11Q9UBB9 837 aaKnown RBP18.49■□□□□ 0.55
CXCL1-201ENST00000395761 TRPV2Q9Y5S1 764 aa18.49■□□□□ 0.55
CXCL1-201ENST00000395761 TET1Q8NFU7 2136 aa18.49■□□□□ 0.55
CXCL1-201ENST00000395761 BRD1O95696 1058 aa18.48■□□□□ 0.55
CXCL1-201ENST00000395761 GHRP10912 638 aa18.48■□□□□ 0.55
CXCL1-201ENST00000395761 TMOD1P28289 359 aa18.48■□□□□ 0.55
CXCL1-201ENST00000395761 MARCKSP29966 332 aaPredicted RBP18.48■□□□□ 0.55
CXCL1-201ENST00000395761 LPIN1Q14693 890 aa18.48■□□□□ 0.55
CXCL1-201ENST00000395761 KIZQ2M2Z5 673 aa18.48■□□□□ 0.55
CXCL1-201ENST00000395761 FBXO47Q5MNV8 452 aa18.48■□□□□ 0.55
CXCL1-201ENST00000395761 HAUS3Q68CZ6 603 aa18.48■□□□□ 0.55
CXCL1-201ENST00000395761 DBF4BQ8NFT6 615 aa18.48■□□□□ 0.55
CXCL1-201ENST00000395761 SNX29Q8TEQ0 813 aa18.48■□□□□ 0.55
CXCL1-201ENST00000395761 ZNF668Q96K58 619 aaPredicted RBP18.48■□□□□ 0.55
CXCL1-201ENST00000395761 NACC1Q96RE7 527 aa18.48■□□□□ 0.55
CXCL1-201ENST00000395761 DHX33Q9H6R0 707 aaKnown RBP18.48■□□□□ 0.55
CXCL1-201ENST00000395761 CHMP5Q9NZZ3 219 aa18.48■□□□□ 0.55
CXCL1-201ENST00000395761 AKT3Q9Y243 479 aa18.48■□□□□ 0.55
CXCL1-201ENST00000395761 GINS2Q9Y248 185 aa18.48■□□□□ 0.55
CXCL1-201ENST00000395761 EVPLQ92817 2033 aa18.47■□□□□ 0.55
CXCL1-201ENST00000395761 M0QZ92 97 aa18.47■□□□□ 0.55
CXCL1-201ENST00000395761 SOX1O00570 391 aaPredicted RBP18.47■□□□□ 0.55
CXCL1-201ENST00000395761 GPR32O75388 356 aa18.47■□□□□ 0.55
CXCL1-201ENST00000395761 XRCC6P12956 609 aaKnown RBP eCLIP18.47■□□□□ 0.55
CXCL1-201ENST00000395761 RARRES1P49788 294 aa18.47■□□□□ 0.55
CXCL1-201ENST00000395761 PLEKHG4Q58EX7 1191 aa18.47■□□□□ 0.55
CXCL1-201ENST00000395761 KRT79Q5XKE5 535 aa18.47■□□□□ 0.55
CXCL1-201ENST00000395761 CNKSR3Q6P9H4 555 aa18.47■□□□□ 0.55
CXCL1-201ENST00000395761 MAP7D2Q96T17 732 aa18.47■□□□□ 0.55
CXCL1-201ENST00000395761 AGO3Q9H9G7 860 aaKnown RBP18.47■□□□□ 0.55
CXCL1-201ENST00000395761 KIAA1024Q9UPX6 916 aa18.47■□□□□ 0.55
CXCL1-201ENST00000395761 ZBBXA8MT70 800 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 ACTN1P12814 892 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 RFC5P40937 340 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 POLGP54098 1239 aaPredicted RBP18.46■□□□□ 0.55
CXCL1-201ENST00000395761 NLRP11P59045 1033 aaKnown RBP18.46■□□□□ 0.55
CXCL1-201ENST00000395761 EMC2Q15006 297 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 SLC39A14Q15043 492 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 ZRSR1Q15695 479 aaKnown RBP18.46■□□□□ 0.55
CXCL1-201ENST00000395761 LRIT3Q3SXY7 679 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 FAM109BQ6ICB4 259 aaPredicted RBP18.46■□□□□ 0.55
CXCL1-201ENST00000395761 TMEM40Q8WWA1 233 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 SLC7A3Q8WY07 619 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 TMEM143Q96AN5 459 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 ZNF396Q96N95 335 aaPredicted RBP18.46■□□□□ 0.55
CXCL1-201ENST00000395761 OSMRQ99650 979 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 ADAMTS10Q9H324 1103 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 XPNPEP1Q9NQW7 623 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 DDX19AQ9NUU7 478 aaKnown RBP18.46■□□□□ 0.55
CXCL1-201ENST00000395761 SUCLA2Q9P2R7 463 aaPredicted RBP18.46■□□□□ 0.55
CXCL1-201ENST00000395761 FBXO2Q9UK22 296 aaPredicted RBP18.46■□□□□ 0.55
CXCL1-201ENST00000395761 DBR1Q9UK59 544 aaKnown RBP18.46■□□□□ 0.55
CXCL1-201ENST00000395761 PPME1Q9Y570 386 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 STK24Q9Y6E0 443 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 KDM3AQ9Y4C1 1321 aa18.46■□□□□ 0.55
CXCL1-201ENST00000395761 SIP14410 1827 aa18.45■□□□□ 0.54
CXCL1-201ENST00000395761 MUTP22033 750 aa18.45■□□□□ 0.54
CXCL1-201ENST00000395761 CD52P31358 61 aa18.45■□□□□ 0.54
CXCL1-201ENST00000395761 NASPP49321 788 aaPredicted RBP18.45■□□□□ 0.54
CXCL1-201ENST00000395761 DNM2P50570 870 aa18.45■□□□□ 0.54
CXCL1-201ENST00000395761 KSR1Q8IVT5 923 aa18.45■□□□□ 0.54
CXCL1-201ENST00000395761 SEPT8Q92599 483 aa18.45■□□□□ 0.54
CXCL1-201ENST00000395761 CLIC6Q96NY7 704 aa18.45■□□□□ 0.54
CXCL1-201ENST00000395761 PNMA5Q96PV4 448 aa18.45■□□□□ 0.54
CXCL1-201ENST00000395761 PLIN2Q99541 437 aa18.45■□□□□ 0.54
CXCL1-201ENST00000395761 JPH2Q9BR39 696 aaPredicted RBP18.45■□□□□ 0.54
CXCL1-201ENST00000395761 GRXCR1A8MXD5 290 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 E9PMD0 336 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 LONP1P36776 959 aaKnown RBP18.44■□□□□ 0.54
CXCL1-201ENST00000395761 GPC3P51654 580 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 CRYBB1P53674 252 aaPredicted RBP18.44■□□□□ 0.54
CXCL1-201ENST00000395761 GRB10Q13322 594 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 IKBKEQ14164 716 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 SPECC1Q5M775 1068 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 TSHZ1Q6ZSZ6 1077 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 KCNK18Q7Z418 384 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 RHPN2Q8IUC4 686 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 LINC00301Q8NCQ3 95 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 PRPF31Q8WWY3 499 aaKnown RBP18.44■□□□□ 0.54
CXCL1-201ENST00000395761 CHAMP1Q96JM3 812 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 AK8Q96MA6 479 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 CCDC43Q96MW1 224 aaKnown RBP18.44■□□□□ 0.54
CXCL1-201ENST00000395761 IFIH1Q9BYX4 1025 aaKnown RBP18.44■□□□□ 0.54
CXCL1-201ENST00000395761 CSRNP2Q9H175 543 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 NOC2LQ9Y3T9 749 aaKnown RBP18.44■□□□□ 0.54
CXCL1-201ENST00000395761 SRPRBQ9Y5M8 271 aaKnown RBP18.44■□□□□ 0.54
CXCL1-201ENST00000395761 SLC4A7Q9Y6M7 1214 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 SQORQ9Y6N5 450 aa18.44■□□□□ 0.54
CXCL1-201ENST00000395761 ABHD14A-ACY1A0A1B0GW23 586 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 USO1O60763 962 aaKnown RBP18.43■□□□□ 0.54
CXCL1-201ENST00000395761 DGAT1O75907 488 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 BAIAP3O94812 1187 aa18.43■□□□□ 0.54
CXCL1-201ENST00000395761 WDR5P61964 334 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms