RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 SOX10P56693 466 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 ASIC2Q16515 512 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 DAW1Q8N136 415 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 SLC35C1Q96A29 364 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 GDAP1L1Q96MZ0 367 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 RIT2Q99578 217 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 ARFGAP3Q9NP61 516 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 OLFML3Q9NRN5 406 aa19.6■□□□□ 0.73
SREBF1-204ENST00000395756 SLC26A4O43511 780 aa19.59■□□□□ 0.73
SREBF1-204ENST00000395756 EXOC3O60645 756 aa19.59■□□□□ 0.73
SREBF1-204ENST00000395756 TACC1O75410 805 aa19.59■□□□□ 0.73
SREBF1-204ENST00000395756 P4HBP07237 508 aaKnown RBP19.59■□□□□ 0.73
SREBF1-204ENST00000395756 RNASE9P60153 205 aaKnown RBP19.59■□□□□ 0.73
SREBF1-204ENST00000395756 WHAMMP3Q1A5X7 153 aa19.59■□□□□ 0.73
SREBF1-204ENST00000395756 NFRKBQ6P4R8 1299 aa19.59■□□□□ 0.73
SREBF1-204ENST00000395756 KRT222Q8N1A0 295 aa19.59■□□□□ 0.73
SREBF1-204ENST00000395756 EHBP1Q8NDI1 1231 aa19.59■□□□□ 0.73
SREBF1-204ENST00000395756 SASH3O75995 380 aa19.59■□□□□ 0.73
SREBF1-204ENST00000395756 COG1Q8WTW3 980 aa19.59■□□□□ 0.73
SREBF1-204ENST00000395756 FIZ1Q96SL8 496 aa19.59■□□□□ 0.73
SREBF1-204ENST00000395756 KIFC3Q9BVG8 833 aa19.59■□□□□ 0.73
SREBF1-204ENST00000395756 GBP3Q9H0R5 595 aa19.59■□□□□ 0.73
SREBF1-204ENST00000395756 PLEKHA4Q9H4M7 779 aa19.59■□□□□ 0.73
SREBF1-204ENST00000395756 PACSIN2Q9UNF0 486 aaPredicted RBP19.59■□□□□ 0.73
SREBF1-204ENST00000395756 PDE2AO00408 941 aaPredicted RBP19.58■□□□□ 0.73
SREBF1-204ENST00000395756 SERPING1P05155 500 aa19.58■□□□□ 0.73
SREBF1-204ENST00000395756 TNNT3P45378 269 aaPredicted RBP19.58■□□□□ 0.73
SREBF1-204ENST00000395756 MARSP56192 900 aaKnown RBP19.58■□□□□ 0.73
SREBF1-204ENST00000395756 PTK2Q05397 1052 aa19.58■□□□□ 0.73
SREBF1-204ENST00000395756 KIAA0753Q2KHM9 967 aa19.58■□□□□ 0.73
SREBF1-204ENST00000395756 SCYL3Q8IZE3 742 aa19.58■□□□□ 0.73
SREBF1-204ENST00000395756 ZSWIM2Q8NEG5 633 aa19.58■□□□□ 0.73
SREBF1-204ENST00000395756 PDCD2LQ9BRP1 358 aa19.58■□□□□ 0.73
SREBF1-204ENST00000395756 FZD9O00144 591 aa19.58■□□□□ 0.72
SREBF1-204ENST00000395756 POLR3GO15318 223 aaPredicted RBP19.58■□□□□ 0.72
SREBF1-204ENST00000395756 YWHABP31946 246 aaKnown RBP19.58■□□□□ 0.72
SREBF1-204ENST00000395756 QARSP47897 775 aaKnown RBP19.58■□□□□ 0.72
SREBF1-204ENST00000395756 FAM102BQ5T8I3 360 aa19.58■□□□□ 0.72
SREBF1-204ENST00000395756 DCAF15Q66K64 600 aa19.58■□□□□ 0.72
SREBF1-204ENST00000395756 IQCDQ96DY2 449 aa19.58■□□□□ 0.72
SREBF1-204ENST00000395756 GANQ9H2C0 597 aa19.58■□□□□ 0.72
SREBF1-204ENST00000395756 ZMYM2Q9UBW7 1377 aa19.58■□□□□ 0.72
SREBF1-204ENST00000395756 PSMC2P35998 433 aaKnown RBP19.57■□□□□ 0.72
SREBF1-204ENST00000395756 VSNL1P62760 191 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 SLC20A2Q08357 652 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 C2orf54Q08AI8 447 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 XKR9Q5GH70 373 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 KLHDC7AQ5VTJ3 777 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 PCNX4Q63HM2 1172 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 GOLPH3Q9H4A6 298 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 AGPAT3Q9NRZ7 376 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 LRRN2O75325 713 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 PEX3P56589 373 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 RBM46Q8TBY0 533 aaKnown RBP19.57■□□□□ 0.72
SREBF1-204ENST00000395756 TSGA10Q9BZW7 698 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 PXMP2Q9NR77 195 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 FRMD4BQ9Y2L6 1034 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 UBIAD1Q9Y5Z9 338 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 TMCO5BA8MYB1 307 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 FTCDO95954 541 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 CCNE2O96020 404 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 RARRES1P49788 294 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 USP14P54578 494 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 KCTD19Q17RG1 926 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-204ENST00000395756 ASTE1Q2TB18 679 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-204ENST00000395756 B3GNT9Q6UX72 402 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 GBP6Q6ZN66 633 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 CNKSR2Q8WXI2 1034 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 FRMPD4Q14CM0 1322 aa19.57■□□□□ 0.72
SREBF1-204ENST00000395756 LOC102724159A0A0B4J2E5 919 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 GOLGA8IPA6NC78 632 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 GOLGA8JA6NMD2 632 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 CCDC169A6NNP5 214 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 BACH1O14867 736 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 SLC16A4O15374 487 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 GFPT2O94808 682 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 KLRC1P26715 233 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 HIRAP54198 1017 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-204ENST00000395756 MAPK7Q13164 816 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 PWP2Q15269 919 aaKnown RBP19.56■□□□□ 0.72
SREBF1-204ENST00000395756 TRIM58Q8NG06 486 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 ZCCHC17Q9NP64 241 aaKnown RBP19.56■□□□□ 0.72
SREBF1-204ENST00000395756 ARHGAP44Q17R89 818 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 LONRF2Q1L5Z9 754 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 CBWD6Q4V339 395 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 CBWD3Q5JTY5 395 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 CBWD5Q5RIA9 395 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 FOXR2Q6PJQ5 311 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 ZNF571Q7Z3V5 609 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-204ENST00000395756 ABCB6Q9NP58 842 aa19.56■□□□□ 0.72
SREBF1-204ENST00000395756 PPP1R12BO60237 982 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-204ENST00000395756 ZRANB2O95218 330 aaKnown RBP eCLIP19.55■□□□□ 0.724e-7■■■□□ 15.6
SREBF1-204ENST00000395756 NR3C2P08235 984 aa19.55■□□□□ 0.72
SREBF1-204ENST00000395756 HOXA7P31268 230 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-204ENST00000395756 DLG4P78352 724 aa19.55■□□□□ 0.72
SREBF1-204ENST00000395756 TMEM132BQ14DG7 1078 aa19.55■□□□□ 0.72
SREBF1-204ENST00000395756 BMT2Q1RMZ1 405 aa19.55■□□□□ 0.72
SREBF1-204ENST00000395756 PAPD7Q5XG87 772 aaKnown RBP19.55■□□□□ 0.72
SREBF1-204ENST00000395756 ZC3H3Q8IXZ2 948 aaKnown RBP19.55■□□□□ 0.72
SREBF1-204ENST00000395756 ELMO3Q96BJ8 720 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms