RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 SART3Q15020 963 aaKnown RBP10.28□□□□□ -0.76
PFDN6-205ENST00000395134 PUM3Q15397 648 aaKnown RBP10.28□□□□□ -0.76
PFDN6-205ENST00000395134 PKN2Q16513 984 aaKnown RBP10.28□□□□□ -0.76
PFDN6-205ENST00000395134 SKOR2Q2VWA4 1001 aaPredicted RBP10.28□□□□□ -0.76
PFDN6-205ENST00000395134 CAVIN4Q5BKX8 364 aa10.28□□□□□ -0.76
PFDN6-205ENST00000395134 ZNF697Q5TEC3 545 aa10.28□□□□□ -0.76
PFDN6-205ENST00000395134 PIK3R6Q5UE93 754 aa10.28□□□□□ -0.76
PFDN6-205ENST00000395134 OTOP1Q7RTM1 612 aa10.28□□□□□ -0.76
PFDN6-205ENST00000395134 TEKT1Q969V4 418 aa10.28□□□□□ -0.76
PFDN6-205ENST00000395134 ELMO3Q96BJ8 720 aa10.28□□□□□ -0.76
PFDN6-205ENST00000395134 FGD4Q96M96 766 aa10.28□□□□□ -0.76
PFDN6-205ENST00000395134 TEPSINQ96N21 525 aa10.28□□□□□ -0.76
PFDN6-205ENST00000395134 PTPN18Q99952 460 aa10.28□□□□□ -0.76
PFDN6-205ENST00000395134 USP44Q9H0E7 712 aa10.28□□□□□ -0.76
PFDN6-205ENST00000395134 AS3MTQ9HBK9 375 aa10.28□□□□□ -0.76
PFDN6-205ENST00000395134 ANLNQ9NQW6 1124 aa10.28□□□□□ -0.76
PFDN6-205ENST00000395134 CCL15-CCL14A0A0B4J2E2 113 aa10.27□□□□□ -0.77
PFDN6-205ENST00000395134 DLX3O60479 287 aa10.27□□□□□ -0.77
PFDN6-205ENST00000395134 ERVK-21P61565 698 aa10.27□□□□□ -0.77
PFDN6-205ENST00000395134 CCL15Q16663 113 aa10.27□□□□□ -0.77
PFDN6-205ENST00000395134 TDRD10Q5VZ19 366 aaKnown RBP10.27□□□□□ -0.77
PFDN6-205ENST00000395134 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.27□□□□□ -0.77
PFDN6-205ENST00000395134 BVESQ8NE79 360 aa10.27□□□□□ -0.77
PFDN6-205ENST00000395134 BRI3BPQ8WY22 251 aa10.27□□□□□ -0.77
PFDN6-205ENST00000395134 AIFM3Q96NN9 605 aa10.27□□□□□ -0.77
PFDN6-205ENST00000395134 KRT82Q9NSB4 513 aa10.27□□□□□ -0.77
PFDN6-205ENST00000395134 DDX20Q9UHI6 824 aaKnown RBP10.27□□□□□ -0.77
PFDN6-205ENST00000395134 CSADQ9Y600 493 aa10.27□□□□□ -0.77
PFDN6-205ENST00000395134 DOCK1Q14185 1865 aa10.27□□□□□ -0.77
PFDN6-205ENST00000395134 CDK5RAP2Q96SN8 1893 aa10.27□□□□□ -0.77
PFDN6-205ENST00000395134 A0A0C4DFX4 3053 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 TTLL8A6PVC2 850 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 EYA2O00167 538 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 NOP56O00567 594 aaKnown RBP10.26□□□□□ -0.77
PFDN6-205ENST00000395134 TBX1O43435 398 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 CBFA2T2O43439 604 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 SLC26A4O43511 780 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 PIP5K1CO60331 668 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 MT-CO1P00395 513 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 LTFP02788 710 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 IFIT1P09914 478 aaKnown RBP10.26□□□□□ -0.77
PFDN6-205ENST00000395134 SLC5A1P13866 664 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 LIG1P18858 919 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 RFX5P48382 616 aaPredicted RBP10.26□□□□□ -0.77
PFDN6-205ENST00000395134 SARSP49591 514 aaKnown RBP10.26□□□□□ -0.77
PFDN6-205ENST00000395134 IL2P60568 153 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 SLFN5Q08AF3 891 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 TCP10Q12799 353 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 GALEQ14376 348 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 PCBP2Q15366 365 aaKnown RBP eCLIP10.26□□□□□ -0.774e-7■■■■□ 19.9
PFDN6-205ENST00000395134 PCSK7Q16549 785 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 C6orf118Q5T5N4 469 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 ZCCHC8Q6NZY4 707 aaKnown RBP10.26□□□□□ -0.77
PFDN6-205ENST00000395134 ZNF354CQ86Y25 554 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 TBC1D22AQ8WUA7 517 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 ZKSCAN4Q969J2 545 aaPredicted RBP10.26□□□□□ -0.77
PFDN6-205ENST00000395134 ACSF2Q96CM8 615 aaPredicted RBP10.26□□□□□ -0.77
PFDN6-205ENST00000395134 MRGPRX3Q96LB0 322 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 WRNIP1Q96S55 665 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 KLHL11Q9NVR0 708 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 TMOD2Q9NZR1 351 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 HCN2Q9UL51 889 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 PA2G4Q9UQ80 394 aaKnown RBP10.26□□□□□ -0.77
PFDN6-205ENST00000395134 PHIPQ8WWQ0 1821 aa10.26□□□□□ -0.77
PFDN6-205ENST00000395134 BLACEA4D250 179 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 C9IYK1 514 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 PMM2O15305 246 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 ZNF500O60304 480 aaPredicted RBP10.25□□□□□ -0.77
PFDN6-205ENST00000395134 FKBP9O95302 570 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 FAM163BP0C2L3 166 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 UBTFL1P0CB47 393 aaPredicted RBP10.25□□□□□ -0.77
PFDN6-205ENST00000395134 SMPD1P17405 629 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 TYRP1P17643 537 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 EIF2AK2P19525 551 aaKnown RBP10.25□□□□□ -0.77
PFDN6-205ENST00000395134 PTMSP20962 102 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 FGFR2P21802 821 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 ADORA1P30542 326 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 GRK4P32298 578 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 ADCYAP1R1P41586 468 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 OTUD7BQ6GQQ9 843 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 APOBEC3HQ6NTF7 200 aaKnown RBP10.25□□□□□ -0.77
PFDN6-205ENST00000395134 C1orf228Q6PIY5 440 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 FKBP9P1Q75LS8 142 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 MIGA2Q7L4E1 593 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 MAMDC2Q7Z304 686 aaPredicted RBP10.25□□□□□ -0.77
PFDN6-205ENST00000395134 ATG9AQ7Z3C6 839 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 ADAT2Q7Z6V5 191 aaKnown RBP10.25□□□□□ -0.77
PFDN6-205ENST00000395134 ZNF598Q86UK7 904 aaKnown RBP10.25□□□□□ -0.77
PFDN6-205ENST00000395134 FAM43AQ8N2R8 423 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 NXPE1Q8N323 547 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.25□□□□□ -0.772e-8■■□□□ 14.5
PFDN6-205ENST00000395134 TRMT2BQ96GJ1 504 aaKnown RBP10.25□□□□□ -0.77
PFDN6-205ENST00000395134 TNIP3Q96KP6 325 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 SCLT1Q96NL6 688 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 KRTAP3-3Q9BYR6 98 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 NLRC4Q9NPP4 1024 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 GTF2IRD1Q9UHL9 959 aa10.25□□□□□ -0.77
PFDN6-205ENST00000395134 SAP30BPQ9UHR5 308 aaKnown RBP10.25□□□□□ -0.77
PFDN6-205ENST00000395134 IPPQ9Y573 584 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms