RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 SLC18A3Q16572 532 aa11.26□□□□□ -0.61
HIF1A-203ENST00000394997 GRIPAP1Q4V328 841 aa11.26□□□□□ -0.61
HIF1A-203ENST00000394997 DCAF12L1Q5VU92 463 aa11.26□□□□□ -0.61
HIF1A-203ENST00000394997 GPIHBP1Q8IV16 184 aa11.26□□□□□ -0.61
HIF1A-203ENST00000394997 CLRN2A0PK11 232 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 ERCC3P19447 782 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 ZC2HC1CQ53FD0 456 aaPredicted RBP11.25□□□□□ -0.61
HIF1A-203ENST00000394997 NIPA1Q7RTP0 329 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 DNAAF5Q86Y56 855 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 KSR1Q8IVT5 923 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 DYDC2Q96IM9 177 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 AGBL1Q96MI9 1066 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 ST6GALNAC4Q9H4F1 302 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 POLD4Q9HCU8 107 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 RALGAPA2Q2PPJ7 1873 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 TCP10L2B9ZVM9 353 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 PTK2Q05397 1052 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 PABPC4Q13310 644 aaKnown RBP eCLIP11.25□□□□□ -0.618e-8■□□□□ 10.9
HIF1A-203ENST00000394997 STIM1Q13586 685 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 ODF2Q5BJF6 829 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 SEC14L1Q92503 715 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 DMGDHQ9UI17 866 aaKnown RBP11.25□□□□□ -0.61
HIF1A-203ENST00000394997 CCNE2O96020 404 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 UCHL3P15374 230 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 SF3A3Q12874 501 aaKnown RBP eCLIP11.25□□□□□ -0.617e-6■■□□□ 12
HIF1A-203ENST00000394997 NFRKBQ6P4R8 1299 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 SLC39A4Q6P5W5 647 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 OTUD6BQ8N6M0 293 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 OSBPL9Q96SU4 736 aa11.25□□□□□ -0.61
HIF1A-203ENST00000394997 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.25□□□□□ -0.61
HIF1A-203ENST00000394997 TYW1Q9NV66 732 aaKnown RBP11.25□□□□□ -0.61
HIF1A-203ENST00000394997 UBE4BO95155 1302 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 LTBP3Q9NS15 1303 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 NCK2O43639 380 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 ITGBL1O95965 494 aaPredicted RBP11.24□□□□□ -0.61
HIF1A-203ENST00000394997 HMGB2P26583 209 aaKnown RBP11.24□□□□□ -0.61
HIF1A-203ENST00000394997 PPATQ06203 517 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 CCDC122Q5T0U0 273 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 RBM26Q5T8P6 1007 aaKnown RBP11.24□□□□□ -0.61
HIF1A-203ENST00000394997 PALB2Q86YC2 1186 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 C12orf56Q8IXR9 622 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 BHMT2Q9H2M3 363 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 PLXNB2O15031 1838 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 DDX3XO00571 662 aaKnown RBP eCLIP11.24□□□□□ -0.612e-13■■■■■ 27.4
HIF1A-203ENST00000394997 PPIP5K2O43314 1243 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 RAD17O75943 681 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 SERPING1P05155 500 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 TRIM21P19474 475 aaKnown RBP11.24□□□□□ -0.61
HIF1A-203ENST00000394997 GJB7Q6PEY0 223 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 FAM76AQ8TAV0 307 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 MXRA8Q9BRK3 442 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 AGO4Q9HCK5 861 aaKnown RBP11.24□□□□□ -0.61
HIF1A-203ENST00000394997 GDF3Q9NR23 364 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 HPCAL4Q9UM19 191 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 SAR1BQ9Y6B6 198 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 COL4A4P53420 1690 aaPredicted RBP11.24□□□□□ -0.61
HIF1A-203ENST00000394997 PMM2O15305 246 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 RXRBP28702 533 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 NMT1P30419 496 aaKnown RBP11.24□□□□□ -0.61
HIF1A-203ENST00000394997 ADSSP30520 456 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 CTTNQ14247 550 aaKnown RBP11.24□□□□□ -0.61
HIF1A-203ENST00000394997 CEP55Q53EZ4 464 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 TAS1R3Q7RTX0 852 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 LDHDQ86WU2 507 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 ZNF526Q8TF50 670 aaPredicted RBP11.24□□□□□ -0.61
HIF1A-203ENST00000394997 RAB34Q9BZG1 259 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 WDR11Q9BZH6 1224 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 SCAF8Q9UPN6 1271 aaKnown RBP11.24□□□□□ -0.61
HIF1A-203ENST00000394997 RIPK3Q9Y572 518 aa11.24□□□□□ -0.61
HIF1A-203ENST00000394997 NCANO14594 1321 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 TISP43B9A030 160 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 FZD9O00144 591 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 NDUFAB1O14561 156 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 MTIF2P46199 727 aaKnown RBP11.23□□□□□ -0.61
HIF1A-203ENST00000394997 IQCEQ6IPM2 695 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 CCNI2Q6ZMN8 369 aaPredicted RBP11.23□□□□□ -0.61
HIF1A-203ENST00000394997 RRAGAQ7L523 313 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 NELFCDQ8IXH7 590 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 RASGEF1CQ8N431 466 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 LRRC27Q9C0I9 530 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 KIAA1683Q9H0B3 1180 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 VIPAS39Q9H9C1 493 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 ZNF219Q9P2Y4 722 aaPredicted RBP11.23□□□□□ -0.61
HIF1A-203ENST00000394997 FAM184BQ9ULE4 1060 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 MCM3APO60318 1980 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 CES2O00748 559 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 TP73O15350 636 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 ATP9AO75110 1047 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 DLG4P78352 724 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 KRT83P78385 493 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 PCNX4Q63HM2 1172 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 ZDHHC14Q8IZN3 488 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 PIGOQ8TEQ8 1089 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 PSMB7Q99436 277 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 ZNHIT6Q9NWK9 470 aaKnown RBP11.23□□□□□ -0.61
HIF1A-203ENST00000394997 BCCIPQ9P287 314 aaKnown RBP eCLIP11.23□□□□□ -0.61
HIF1A-203ENST00000394997 HDAC9Q9UKV0 1011 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 SAMM50Q9Y512 469 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 PCDHA3Q9Y5H8 950 aa11.23□□□□□ -0.61
HIF1A-203ENST00000394997 ZNF236Q9UL36 1845 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms