RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 HNRNPLLQ8WVV9 542 aaKnown RBP15.29■□□□□ 0.04
SNCA-204ENST00000394989 RPAP3Q9H6T3 665 aaPredicted RBP15.29■□□□□ 0.04
SNCA-204ENST00000394989 JADE2Q9NQC1 790 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 ZHX2Q9Y6X8 837 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 RLFQ13129 1914 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 ATP8B1O43520 1251 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 SLC18A3Q16572 532 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 NFIL3Q16649 462 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 ODR4Q5SWX8 454 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 BEND6Q5SZJ8 279 aaPredicted RBP15.29■□□□□ 0.04
SNCA-204ENST00000394989 TCERG1LQ5VWI1 586 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 MIER3Q7Z3K6 550 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 DRC1Q96MC2 740 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 METTL14Q9HCE5 456 aaKnown RBP15.29■□□□□ 0.04
SNCA-204ENST00000394989 SEL1LQ9UBV2 794 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 SNX12Q9UMY4 172 aa15.29■□□□□ 0.04
SNCA-204ENST00000394989 HIP1RO75146 1068 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 PHACTR2O75167 634 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 TACC1O75410 805 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 PPP1R37O75864 691 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 EIF2AK2P19525 551 aaKnown RBP15.28■□□□□ 0.04
SNCA-204ENST00000394989 MTMR1Q13613 665 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 PGM5Q15124 567 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 CREG2Q8IUH2 290 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 ZKSCAN4Q969J2 545 aaPredicted RBP15.28■□□□□ 0.04
SNCA-204ENST00000394989 UBXN6Q9BZV1 441 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 ADAMTS1Q9UHI8 967 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 BCS1LQ9Y276 419 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 RIPK3Q9Y572 518 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 GJA3Q9Y6H8 435 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 FZD9O00144 591 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 ENOX2Q16206 610 aaKnown RBP15.28■□□□□ 0.04
SNCA-204ENST00000394989 PRAMEF18Q5VWM3 479 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 COG1Q8WTW3 980 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 COL11A1P12107 1806 aaPredicted RBP15.28■□□□□ 0.04
SNCA-204ENST00000394989 ARHGEF35A5YM69 484 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 POTEB2H3BUK9 544 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 BUB1O43683 1085 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 PTK2Q05397 1052 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 KLHL30Q0D2K2 578 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 SMC1AQ14683 1233 aaKnown RBP15.28■□□□□ 0.04
SNCA-204ENST00000394989 NEK9Q8TD19 979 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 PACSIN1Q9BY11 444 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 PLEKHA4Q9H4M7 779 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 SUGCTQ9HAC7 445 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 AGPAT3Q9NRZ7 376 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 GINM1Q9NU53 330 aa15.28■□□□□ 0.04
SNCA-204ENST00000394989 VWA5AO00534 786 aa15.27■□□□□ 0.04
SNCA-204ENST00000394989 ATP9AO75110 1047 aa15.27■□□□□ 0.04
SNCA-204ENST00000394989 P4HBP07237 508 aaKnown RBP15.27■□□□□ 0.04
SNCA-204ENST00000394989 GJB7Q6PEY0 223 aa15.27■□□□□ 0.04
SNCA-204ENST00000394989 PADI6Q6TGC4 694 aa15.27■□□□□ 0.04
SNCA-204ENST00000394989 SH2D3AQ9BRG2 576 aa15.27■□□□□ 0.04
SNCA-204ENST00000394989 MTFR1LQ9H019 292 aa15.27■□□□□ 0.04
SNCA-204ENST00000394989 ABCB6Q9NP58 842 aa15.27■□□□□ 0.04
SNCA-204ENST00000394989 DMAC2Q9NW81 257 aa15.27■□□□□ 0.04
SNCA-204ENST00000394989 GCNT4Q9P109 453 aa15.27■□□□□ 0.04
SNCA-204ENST00000394989 TMEM150BA6NC51 233 aa15.27■□□□□ 0.03
SNCA-204ENST00000394989 MYO1CO00159 1063 aa15.27■□□□□ 0.03
SNCA-204ENST00000394989 PSMC2P35998 433 aaKnown RBP15.27■□□□□ 0.03
SNCA-204ENST00000394989 ASIC2Q16515 512 aa15.27■□□□□ 0.03
SNCA-204ENST00000394989 UGCGQ16739 394 aa15.27■□□□□ 0.03
SNCA-204ENST00000394989 MAEAQ7L5Y9 396 aa15.27■□□□□ 0.03
SNCA-204ENST00000394989 ZNF571Q7Z3V5 609 aaPredicted RBP15.27■□□□□ 0.03
SNCA-204ENST00000394989 FAM186BQ8IYM0 893 aa15.27■□□□□ 0.03
SNCA-204ENST00000394989 ATG4CQ96DT6 458 aa15.27■□□□□ 0.03
SNCA-204ENST00000394989 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.03
SNCA-204ENST00000394989 UBE4BO95155 1302 aa15.27■□□□□ 0.03
SNCA-204ENST00000394989 MAP2K7O14733 419 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 RARRES1P49788 294 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 USP14P54578 494 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 JAM2P57087 298 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 IRX3P78415 501 aaPredicted RBP15.26■□□□□ 0.03
SNCA-204ENST00000394989 NFRKBQ6P4R8 1299 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 RASSF4Q9H2L5 321 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 MAP3K20Q9NYL2 800 aaKnown RBP15.26■□□□□ 0.03
SNCA-204ENST00000394989 NCK2O43639 380 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 KLRC1P26715 233 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 BACE1P56817 501 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 WDR93Q6P2C0 686 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 GBP6Q6ZN66 633 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 TLR10Q9BXR5 811 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 GBP3Q9H0R5 595 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 PXMP2Q9NR77 195 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 ZNF112Q9UJU3 913 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 FBXL5Q9UKA1 691 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 ZNF541Q9H0D2 1346 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 PHIPQ8WWQ0 1821 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 LTBP3Q9NS15 1303 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 GTPBP10A4D1E9 387 aaKnown RBP15.26■□□□□ 0.03
SNCA-204ENST00000394989 PRLRP16471 622 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 RNF10Q8N5U6 811 aaKnown RBP15.26■□□□□ 0.03
SNCA-204ENST00000394989 OSBPL9Q96SU4 736 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 RMDN3Q96TC7 470 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 PSMB7Q99436 277 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 PDCD2LQ9BRP1 358 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.26■□□□□ 0.03
SNCA-204ENST00000394989 L1RE1Q9UN81 338 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 SAMM50Q9Y512 469 aa15.26■□□□□ 0.03
SNCA-204ENST00000394989 CXCR5P32302 372 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms