RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 PPP1R12BO60237 982 aaPredicted RBP16.78■□□□□ 0.28
UBE2D3-207ENST00000394801 P4HBP07237 508 aaKnown RBP16.78■□□□□ 0.28
UBE2D3-207ENST00000394801 MAPK7Q13164 816 aa16.78■□□□□ 0.28
UBE2D3-207ENST00000394801 GPS2Q13227 327 aa16.78■□□□□ 0.28
UBE2D3-207ENST00000394801 MYBPC2Q14324 1141 aa16.78■□□□□ 0.28
UBE2D3-207ENST00000394801 KIAA0753Q2KHM9 967 aa16.78■□□□□ 0.28
UBE2D3-207ENST00000394801 MAP9Q49MG5 647 aa16.78■□□□□ 0.28
UBE2D3-207ENST00000394801 ODR4Q5SWX8 454 aa16.78■□□□□ 0.28
UBE2D3-207ENST00000394801 TCERG1LQ5VWI1 586 aa16.78■□□□□ 0.28
UBE2D3-207ENST00000394801 HS2ST1Q7LGA3 356 aa16.78■□□□□ 0.28
UBE2D3-207ENST00000394801 GOLGA5Q8TBA6 731 aa16.78■□□□□ 0.28
UBE2D3-207ENST00000394801 TMEM174Q8WUU8 243 aa16.78■□□□□ 0.28
UBE2D3-207ENST00000394801 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.78■□□□□ 0.28
UBE2D3-207ENST00000394801 A0A0U1RQG5 324 aaPredicted RBP16.77■□□□□ 0.28
UBE2D3-207ENST00000394801 ARHGEF35A5YM69 484 aa16.77■□□□□ 0.28
UBE2D3-207ENST00000394801 CTNND1O60716 968 aaKnown RBP16.77■□□□□ 0.28
UBE2D3-207ENST00000394801 EIF3JO75822 258 aaKnown RBP16.77■□□□□ 0.28
UBE2D3-207ENST00000394801 TNIP1Q15025 636 aa16.77■□□□□ 0.28
UBE2D3-207ENST00000394801 DAW1Q8N136 415 aa16.77■□□□□ 0.28
UBE2D3-207ENST00000394801 BANK1Q8NDB2 785 aa16.77■□□□□ 0.28
UBE2D3-207ENST00000394801 JDP2Q8WYK2 163 aa16.77■□□□□ 0.28
UBE2D3-207ENST00000394801 IKZF4Q9H2S9 585 aa16.77■□□□□ 0.28
UBE2D3-207ENST00000394801 VIPAS39Q9H9C1 493 aa16.77■□□□□ 0.28
UBE2D3-207ENST00000394801 ZCCHC17Q9NP64 241 aaKnown RBP16.77■□□□□ 0.28
UBE2D3-207ENST00000394801 AGPAT3Q9NRZ7 376 aa16.77■□□□□ 0.28
UBE2D3-207ENST00000394801 GCNT4Q9P109 453 aa16.77■□□□□ 0.28
UBE2D3-207ENST00000394801 H3BQF6 201 aa16.77■□□□□ 0.27
UBE2D3-207ENST00000394801 MAPTP10636 758 aaKnown RBP16.77■□□□□ 0.27
UBE2D3-207ENST00000394801 BAG6P46379 1132 aa16.77■□□□□ 0.27
UBE2D3-207ENST00000394801 MRPS9P82933 396 aaKnown RBP16.77■□□□□ 0.27
UBE2D3-207ENST00000394801 PPP2R5AQ15172 486 aa16.77■□□□□ 0.27
UBE2D3-207ENST00000394801 TKFCQ3LXA3 575 aa16.77■□□□□ 0.27
UBE2D3-207ENST00000394801 CCNI2Q6ZMN8 369 aaPredicted RBP16.77■□□□□ 0.27
UBE2D3-207ENST00000394801 MIER3Q7Z3K6 550 aa16.77■□□□□ 0.27
UBE2D3-207ENST00000394801 IL31RAQ8NI17 732 aa16.77■□□□□ 0.27
UBE2D3-207ENST00000394801 AGO4Q9HCK5 861 aaKnown RBP16.77■□□□□ 0.27
UBE2D3-207ENST00000394801 PDE11AQ9HCR9 933 aa16.77■□□□□ 0.27
UBE2D3-207ENST00000394801 DBR1Q9UK59 544 aaKnown RBP16.77■□□□□ 0.27
UBE2D3-207ENST00000394801 NENFQ9UMX5 172 aa16.77■□□□□ 0.27
UBE2D3-207ENST00000394801 FER1L6Q2WGJ9 1857 aa16.76■□□□□ 0.27
UBE2D3-207ENST00000394801 POLR3GO15318 223 aaPredicted RBP16.76■□□□□ 0.27
UBE2D3-207ENST00000394801 LYPLA2O95372 231 aa16.76■□□□□ 0.27
UBE2D3-207ENST00000394801 RPS12P25398 132 aaKnown RBP16.76■□□□□ 0.27
UBE2D3-207ENST00000394801 C2orf54Q08AI8 447 aa16.76■□□□□ 0.27
UBE2D3-207ENST00000394801 SYTL5Q8TDW5 730 aaPredicted RBP16.76■□□□□ 0.27
UBE2D3-207ENST00000394801 TAOK3Q9H2K8 898 aa16.76■□□□□ 0.27
UBE2D3-207ENST00000394801 PNMA2Q9UL42 364 aa16.76■□□□□ 0.27
UBE2D3-207ENST00000394801 NCK2O43639 380 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 HIP1RO75146 1068 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 PALMO75781 387 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 PAFAH1B1P43034 410 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 NAP1L1P55209 391 aaKnown RBP16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 ITGB3BPQ13352 177 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 COG2Q14746 738 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 MEI1Q5TIA1 1274 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 CCDC70Q6NSX1 233 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 PADI6Q6TGC4 694 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 PACSIN1Q9BY11 444 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 RNF216Q9NWF9 866 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 NAGPAQ9UK23 515 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 ZHX2Q9Y6X8 837 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 LRRIQ3A6PVS8 624 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 CYP2C19P33261 490 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 FMO5P49326 533 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 KSR1Q8IVT5 923 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 TBC1D22BQ9NU19 505 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 AJAP1Q9UKB5 411 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 PPP1R9AQ9ULJ8 1098 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 FRMD4BQ9Y2L6 1034 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 DAAM1Q9Y4D1 1078 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 MYH11P35749 1972 aa16.75■□□□□ 0.27
UBE2D3-207ENST00000394801 EGFRP00533 1210 aa16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 FDX1P10109 184 aa16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 ALAS1P13196 640 aa16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 CXCR5P32302 372 aa16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 ALCAMQ13740 583 aa16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 MUM1L1Q5H9M0 696 aa16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 DEFB132Q7Z7B7 95 aa16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 CPXCR1Q8N123 301 aa16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 RAVER2Q9HCJ3 691 aaKnown RBP16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 DDX39AO00148 427 aaKnown RBP16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 FLOT1O75955 427 aa16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 GFPT2O94808 682 aa16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 FERP16591 822 aa16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 QARSP47897 775 aaKnown RBP16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 ENOX2Q16206 610 aaKnown RBP16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 CFAP221Q4G0U5 840 aa16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 DALRD3Q5D0E6 543 aaKnown RBP16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 CCDC181Q5TID7 509 aa16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 ALKBH5Q6P6C2 394 aaKnown RBP16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 LARSQ9P2J5 1176 aaKnown RBP16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 SCAF8Q9UPN6 1271 aaKnown RBP16.74■□□□□ 0.27
UBE2D3-207ENST00000394801 RARRES1P49788 294 aa16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 RPS6P62753 249 aaKnown RBP16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 MTMR1Q13613 665 aa16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 TAAR1Q96RJ0 339 aa16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 LRRC1Q9BTT6 524 aa16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 STK33Q9BYT3 514 aa16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 ACBD3Q9H3P7 528 aa16.73■□□□□ 0.27
UBE2D3-207ENST00000394801 INTUQ9ULD6 942 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms