RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 PAGR1Q9BTK6 254 aa20.02■□□□□ 0.79
PCDHA1-202ENST00000394633 SPON1Q9HCB6 807 aa20.02■□□□□ 0.79
PCDHA1-202ENST00000394633 PCDHA1Q9Y5I3 950 aa20.02■□□□□ 0.79
PCDHA1-202ENST00000394633 NFS1Q9Y697 457 aa20.02■□□□□ 0.79
PCDHA1-202ENST00000394633 PGRMC1O00264 195 aaKnown RBP20.01■□□□□ 0.79
PCDHA1-202ENST00000394633 SART1O43290 800 aaKnown RBP20.01■□□□□ 0.79
PCDHA1-202ENST00000394633 SPATA31C1P0DKV0 1188 aa20.01■□□□□ 0.79
PCDHA1-202ENST00000394633 XRCC5P13010 732 aaKnown RBP20.01■□□□□ 0.79
PCDHA1-202ENST00000394633 JAM2P57087 298 aa20.01■□□□□ 0.79
PCDHA1-202ENST00000394633 ZFPM1Q8IX07 1006 aa20.01■□□□□ 0.79
PCDHA1-202ENST00000394633 GLT8D2Q9H1C3 349 aa20.01■□□□□ 0.79
PCDHA1-202ENST00000394633 ZNRF3Q9ULT6 936 aa20.01■□□□□ 0.79
PCDHA1-202ENST00000394633 STXBP5LQ9Y2K9 1186 aa20.01■□□□□ 0.79
PCDHA1-202ENST00000394633 PDXKO00764 312 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 CALUO43852 315 aaPredicted RBP20■□□□□ 0.79
PCDHA1-202ENST00000394633 VIL1P09327 827 aaKnown RBP20■□□□□ 0.79
PCDHA1-202ENST00000394633 SEC24CP53992 1094 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 SLFN11Q7Z7L1 901 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 SUGP1Q8IWZ8 645 aaKnown RBP20■□□□□ 0.79
PCDHA1-202ENST00000394633 OR2W6PQ8NHA6 318 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 CRYGNQ8WXF5 182 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 GMLQ99445 158 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 BUD13Q9BRD0 619 aaKnown RBP eCLIP20■□□□□ 0.79
PCDHA1-202ENST00000394633 DDX47Q9H0S4 455 aaKnown RBP20■□□□□ 0.79
PCDHA1-202ENST00000394633 SERPINA10Q9UK55 444 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 ASTN1O14525 1302 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 ATP8B3O60423 1300 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 MEIS2O14770 477 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 FLOT1O75955 427 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 CASP4P49662 377 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 CXCL9Q07325 125 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 GJB7Q6PEY0 223 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 MOXD1Q6UVY6 613 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 SPATS2Q86XZ4 545 aaKnown RBP20■□□□□ 0.79
PCDHA1-202ENST00000394633 BCAS3Q9H6U6 928 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 DNM3Q9UQ16 869 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 SIPA1L1O43166 1804 aa20■□□□□ 0.79
PCDHA1-202ENST00000394633 TMCO5BA8MYB1 307 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 RSPH10B2B2RC85 870 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 MEFVO15553 781 aaPredicted RBP19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 RSPH10BP0C881 870 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 RPA1P27694 616 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 ARHGAP4P98171 946 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 KCTD19Q17RG1 926 aaPredicted RBP19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 PRR16Q569H4 304 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 FBXW10Q5XX13 1052 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 PEX26Q7Z412 305 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 NLRP14Q86W24 1093 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 MYCBPAPQ8TBZ2 947 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 FHDC1Q9C0D6 1143 aaPredicted RBP19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 FBXL5Q9UKA1 691 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 DDX3XO00571 662 aaKnown RBP eCLIP19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 NR3C1P04150 777 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 H2AFZP0C0S5 128 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 ITGA4P13612 1032 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 HPDP32754 393 aaPredicted RBP19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 GTF2A1P52655 376 aaPredicted RBP19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 TCP10Q12799 353 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 TCERG1LQ5VWI1 586 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 H2AFVQ71UI9 128 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 RASGEF1CQ8N431 466 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 SLC35C1Q96A29 364 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 LRRC45Q96CN5 670 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 PRMT6Q96LA8 375 aaPredicted RBP19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 CCT8L2Q96SF2 557 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 MRIQ9BWK5 157 aa19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 TYW1Q9NV66 732 aaKnown RBP19.99■□□□□ 0.79
PCDHA1-202ENST00000394633 GOLGA6L10A6NI86 522 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 CCDC188H7C350 402 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 RAD21O60216 631 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 ANXA13P27216 316 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 FLT3P36888 993 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 HDLBPQ00341 1268 aaKnown RBP19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 BMT2Q1RMZ1 405 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 OTUD6BQ8N6M0 293 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 ERMNQ8TAM6 284 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 LENG9Q96B70 501 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 VPS33BQ9H267 617 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 CENPHQ9H3R5 247 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 TDRD3Q9H7E2 651 aaKnown RBP19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 GCNT4Q9P109 453 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 SUCLA2Q9P2R7 463 aaPredicted RBP19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 A0A0A6YYK5 440 aaPredicted RBP19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 GCOM1H8Y6P7 765 aaPredicted RBP19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 KRIT1O00522 736 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 KIAA0754O94854 1291 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 MYZAPP0CAP1 466 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 FNTAP49354 379 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 ZNF844Q08AG5 666 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 AP3B2Q13367 1082 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 KCNV1Q6PIU1 500 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 NT5DC3Q86UY8 548 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 METTL14Q9HCE5 456 aaKnown RBP19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 FAM198AQ9UFP1 575 aa19.98■□□□□ 0.79
PCDHA1-202ENST00000394633 SRRM3A6NNA2 597 aaPredicted RBP19.97■□□□□ 0.79
PCDHA1-202ENST00000394633 CLIC2O15247 247 aa19.97■□□□□ 0.79
PCDHA1-202ENST00000394633 SLC16A3O15427 465 aaKnown RBP19.97■□□□□ 0.79
PCDHA1-202ENST00000394633 HNRNPH1P31943 449 aaKnown RBP19.97■□□□□ 0.79
PCDHA1-202ENST00000394633 KCNA1Q09470 495 aa19.97■□□□□ 0.79
PCDHA1-202ENST00000394633 SHROOM1Q2M3G4 852 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms