RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 NUCKS1Q9H1E3 243 aaKnown RBP16.96■□□□□ 0.31
PTBP1-204ENST00000394601 TDRD3Q9H7E2 651 aaKnown RBP16.96■□□□□ 0.31
PTBP1-204ENST00000394601 HYOU1Q9Y4L1 999 aa16.96■□□□□ 0.31
PTBP1-204ENST00000394601 GH2P01242 217 aa16.96■□□□□ 0.31
PTBP1-204ENST00000394601 SLC9A1P19634 815 aa16.96■□□□□ 0.31
PTBP1-204ENST00000394601 NR2F2P24468 414 aa16.96■□□□□ 0.31
PTBP1-204ENST00000394601 SLC9C1Q4G0N8 1177 aa16.96■□□□□ 0.31
PTBP1-204ENST00000394601 FRMD5Q7Z6J6 570 aa16.96■□□□□ 0.31
PTBP1-204ENST00000394601 MS4A14Q96JA4 679 aa16.96■□□□□ 0.31
PTBP1-204ENST00000394601 POLR3CQ9BUI4 534 aaPredicted RBP16.96■□□□□ 0.31
PTBP1-204ENST00000394601 IKZF4Q9H2S9 585 aa16.96■□□□□ 0.31
PTBP1-204ENST00000394601 PLCB1Q9NQ66 1216 aa16.96■□□□□ 0.31
PTBP1-204ENST00000394601 MARCH6O60337 910 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 TBC1D5Q92609 795 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 PRR12Q9ULL5 1215 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 NFU1Q9UMS0 254 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 COL4A5P29400 1685 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 UTRNP46939 3433 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 TGFB1I1O43294 461 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 TCP1P17987 556 aaKnown RBP16.95■□□□□ 0.3
PTBP1-204ENST00000394601 PON1P27169 355 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 ECE1P42892 770 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 EPHA7Q15375 998 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 TTMPQ5BVD1 217 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 CFAP58Q5T655 872 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 ARMC3Q5W041 872 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 B4GALNT4Q76KP1 1039 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 CCDC13Q8IYE1 715 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 OR2W6PQ8NHA6 318 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 RBM12Q9NTZ6 932 aaKnown RBP16.95■□□□□ 0.3
PTBP1-204ENST00000394601 RAD21O60216 631 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 BMP3P12645 472 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 EZRP15311 586 aaKnown RBP16.95■□□□□ 0.3
PTBP1-204ENST00000394601 MCM3P25205 808 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 JAM2P57087 298 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 STYK1Q6J9G0 422 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 ZNF571Q7Z3V5 609 aaPredicted RBP16.95■□□□□ 0.3
PTBP1-204ENST00000394601 FAM133AQ8N9E0 248 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 RUBCNQ92622 972 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 RGL1Q9NZL6 768 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 GGT7Q9UJ14 662 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 HDAC9Q9UKV0 1011 aa16.95■□□□□ 0.3
PTBP1-204ENST00000394601 PDXKO00764 312 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 ENTPD3O75355 529 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 CASP4P49662 377 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 PTK2Q05397 1052 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 MEI1Q5TIA1 1274 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 MAEAQ7L5Y9 396 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 OTOP1Q7RTM1 612 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 MICAL1Q8TDZ2 1067 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 TCP11Q8WWU5 503 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 EIF2AK1Q9BQI3 630 aaKnown RBP16.94■□□□□ 0.3
PTBP1-204ENST00000394601 SLC40A1Q9NP59 571 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 DNM3Q9UQ16 869 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 TNS1Q9HBL0 1735 aaKnown RBP16.94■□□□□ 0.3
PTBP1-204ENST00000394601 BTNL10A8MVZ5 291 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 PALMO75781 387 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 FOSP01100 380 aaPredicted RBP16.94■□□□□ 0.3
PTBP1-204ENST00000394601 TMOD1P28289 359 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 TNFRSF8P28908 595 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 AOC3Q16853 763 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 NAA35Q5VZE5 725 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 SGSM3Q96HU1 749 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 NOX5Q96PH1 765 aa16.94■□□□□ 0.3
PTBP1-204ENST00000394601 TRIM6Q9C030 488 aaPredicted RBP16.94■□□□□ 0.3
PTBP1-204ENST00000394601 WRAP73Q9P2S5 460 aaPredicted RBP16.94■□□□□ 0.3
PTBP1-204ENST00000394601 SMIM23A6NLE4 172 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 ZBTB39O15060 712 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 OPA1O60313 960 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 PSMD10O75832 226 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 SLITRK3O94933 977 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 CLTAP09496 248 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 RINT1Q6NUQ1 792 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 KSR1Q8IVT5 923 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 SLC35C1Q96A29 364 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 ZIM3Q96PE6 472 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 ADAMTS1Q9UHI8 967 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 SYNPO2Q9UMS6 1093 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 GRID2IPA4D2P6 1211 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 KIF1CO43896 1103 aaKnown RBP16.93■□□□□ 0.3
PTBP1-204ENST00000394601 UCHL3P15374 230 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 B3GNT9Q6UX72 402 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 CALR3Q96L12 384 aaKnown RBP16.93■□□□□ 0.3
PTBP1-204ENST00000394601 INPP4AQ96PE3 977 aaPredicted RBP16.93■□□□□ 0.3
PTBP1-204ENST00000394601 ALS2CR12Q96Q35 445 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 BHMT2Q9H2M3 363 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 GRIN2DO15399 1336 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 CETN3O15182 167 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 LSP1P33241 339 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 RBM5P52756 815 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■■□□□ 11.4
PTBP1-204ENST00000394601 CYP4A11Q02928 519 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 SLC15A2Q16348 729 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 C1orf186Q6ZWK4 172 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 SPICE1Q8N0Z3 855 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 OLFML3Q9NRN5 406 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 TMEM59LQ9UK28 342 aa16.93■□□□□ 0.3
PTBP1-204ENST00000394601 EYA4O95677 639 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 GUCY2DQ02846 1103 aa16.92■□□□□ 0.3
PTBP1-204ENST00000394601 TRADDQ15628 312 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms