RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CAPN6Q9Y6Q1 641 aa16.53■□□□□ 0.24
GPC3-202ENST00000394299 SPDYE16A6NNV3 312 aaPredicted RBP16.52■□□□□ 0.24
GPC3-202ENST00000394299 C19orf81C9J6K1 198 aa16.52■□□□□ 0.24
GPC3-202ENST00000394299 K7ENM7 598 aa16.52■□□□□ 0.24
GPC3-202ENST00000394299 TULP1O00294 542 aaPredicted RBP16.52■□□□□ 0.24
GPC3-202ENST00000394299 TRIM49P0CI25 452 aa16.52■□□□□ 0.24
GPC3-202ENST00000394299 TRIM49CP0CI26 452 aa16.52■□□□□ 0.24
GPC3-202ENST00000394299 MAGEA1P43355 309 aa16.52■□□□□ 0.24
GPC3-202ENST00000394299 EXOC3L4Q17RC7 722 aa16.52■□□□□ 0.24
GPC3-202ENST00000394299 FAM186BQ8IYM0 893 aa16.52■□□□□ 0.24
GPC3-202ENST00000394299 TMOD4Q9NZQ9 345 aa16.52■□□□□ 0.24
GPC3-202ENST00000394299 RLFQ13129 1914 aa16.52■□□□□ 0.24
GPC3-202ENST00000394299 ZNF185O15231 689 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 SEC31AO94979 1220 aaKnown RBP16.52■□□□□ 0.23
GPC3-202ENST00000394299 UCHL3P15374 230 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 KLHDC7AQ5VTJ3 777 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 MOB2Q70IA6 237 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 SYCP3Q8IZU3 236 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 NEK9Q8TD19 979 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 CAPZA3Q96KX2 299 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 STRA6Q9BX79 667 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 PARD6BQ9BYG5 372 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 EDEM3Q9BZQ6 932 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 GBP3Q9H0R5 595 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 CYP39A1Q9NYL5 469 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 ADAMTS1Q9UHI8 967 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 SNCAIPQ9Y6H5 919 aa16.52■□□□□ 0.23
GPC3-202ENST00000394299 COL11A1P12107 1806 aaPredicted RBP16.52■□□□□ 0.23
GPC3-202ENST00000394299 FAM170AA1A519 330 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 PPP1R37O75864 691 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 LCA5LO95447 670 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 SLC9C1Q4G0N8 1177 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 XKR9Q5GH70 373 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 ZNF662Q6ZS27 426 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 RBM46Q8TBY0 533 aaKnown RBP16.51■□□□□ 0.23
GPC3-202ENST00000394299 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.51■□□□□ 0.231e-12■■□□□ 13.7
GPC3-202ENST00000394299 R3HDMLQ9H3Y0 253 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 SIX2Q9NPC8 291 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 KCND2Q9NZV8 630 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 SEL1LQ9UBV2 794 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 BUB1O43683 1085 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 PSMC2P35998 433 aaKnown RBP16.51■□□□□ 0.23
GPC3-202ENST00000394299 SUPT20HL1Q3ZLR7 823 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 ANO5Q75V66 913 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 TRAPPC11Q7Z392 1133 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 GOLGA1Q92805 767 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 SECISBP2LQ93073 1101 aaKnown RBP16.51■□□□□ 0.23
GPC3-202ENST00000394299 KIFC3Q9BVG8 833 aa16.51■□□□□ 0.23
GPC3-202ENST00000394299 A0A087X0T9 212 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 SLC16A4O15374 487 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 LRRN2O75325 713 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 SERPING1P05155 500 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 FAM228BP0C875 321 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 FDX1P10109 184 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 CCND2P30279 289 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 PEX3P56589 373 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 CNTN2Q02246 1040 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 MAPK8IP2Q13387 824 aaPredicted RBP16.5■□□□□ 0.23
GPC3-202ENST00000394299 CBWD6Q4V339 395 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 CBWD3Q5JTY5 395 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 CBWD5Q5RIA9 395 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 HS2ST1Q7LGA3 356 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 NLRX1Q86UT6 975 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 NOA1Q8NC60 698 aaKnown RBP16.5■□□□□ 0.23
GPC3-202ENST00000394299 TEX13BQ9BXU2 312 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 METTL14Q9HCE5 456 aaKnown RBP16.5■□□□□ 0.23
GPC3-202ENST00000394299 DMAC2Q9NW81 257 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 GCNT4Q9P109 453 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 TCEAL9Q9UHQ7 104 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 DBR1Q9UK59 544 aaKnown RBP16.5■□□□□ 0.23
GPC3-202ENST00000394299 WDR64B1ANS9 1081 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 SLC16A3O15427 465 aaKnown RBP16.5■□□□□ 0.23
GPC3-202ENST00000394299 ZNF862O60290 1169 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 PSMC5P62195 406 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 DLG4P78352 724 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 KLHL30Q0D2K2 578 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 FAM102BQ5T8I3 360 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 IRF2BP2Q7Z5L9 587 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 NSUN6Q8TEA1 469 aaKnown RBP16.5■□□□□ 0.23
GPC3-202ENST00000394299 MMS19Q96T76 1030 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 PACSIN1Q9BY11 444 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 RNF181Q9P0P0 153 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 GABBR1Q9UBS5 961 aa16.5■□□□□ 0.23
GPC3-202ENST00000394299 PARP14Q460N5 1801 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 PCNTO95613 3336 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 EXOC3O60645 756 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 RHOXF2BP0C7M4 288 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 KCNA2P16389 499 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 SP2Q02086 613 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 SWSAP1Q6NVH7 229 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 GBP6Q6ZN66 633 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 C4orf19Q8IY42 314 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 CEP112Q8N8E3 955 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 CCDC43Q96MW1 224 aaKnown RBP16.49■□□□□ 0.23
GPC3-202ENST00000394299 INPP4AQ96PE3 977 aaPredicted RBP16.49■□□□□ 0.23
GPC3-202ENST00000394299 SPAG5Q96R06 1193 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 PSMB7Q99436 277 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 RHOXF2Q9BQY4 288 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 CBWD1Q9BRT8 395 aa16.49■□□□□ 0.23
GPC3-202ENST00000394299 HOXC10Q9NYD6 342 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms