RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 TUBE1Q9UJT0 475 aa21.52■■□□□ 1.04
PSEN1-203ENST00000394157 ARID2Q68CP9 1835 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 A0A087WWV3 80 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 IGKV6-21A0A0C4DH24 114 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 CCDC85CA6NKD9 419 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 ACTN4O43707 911 aaKnown RBP21.51■■□□□ 1.03
PSEN1-203ENST00000394157 CYP11B2P19099 503 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 KLRC1P26715 233 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 POLGP54098 1239 aaPredicted RBP21.51■■□□□ 1.03
PSEN1-203ENST00000394157 IGBP1P78318 339 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 TPRNQ4KMQ1 711 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 TAF2Q6P1X5 1199 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 MTHFD1LQ6UB35 978 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 ANKRD33Q7Z3H0 272 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 LRRC15Q8TF66 581 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 ATP6V0A4Q9HBG4 840 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 BMP2KQ9NSY1 1161 aaPredicted RBP21.51■■□□□ 1.03
PSEN1-203ENST00000394157 PCDHA2Q9Y5H9 948 aa21.51■■□□□ 1.03
PSEN1-203ENST00000394157 KINO60870 393 aaKnown RBP21.5■■□□□ 1.03
PSEN1-203ENST00000394157 MBD3O95983 291 aa21.5■■□□□ 1.03
PSEN1-203ENST00000394157 SSBP05455 408 aaKnown RBP eCLIP21.5■■□□□ 1.03
PSEN1-203ENST00000394157 MYL1P05976 194 aa21.5■■□□□ 1.03
PSEN1-203ENST00000394157 TMOD1P28289 359 aa21.5■■□□□ 1.03
PSEN1-203ENST00000394157 DNM2P50570 870 aa21.5■■□□□ 1.03
PSEN1-203ENST00000394157 MCM6Q14566 821 aa21.5■■□□□ 1.03
PSEN1-203ENST00000394157 LONRF3Q496Y0 759 aa21.5■■□□□ 1.03
PSEN1-203ENST00000394157 GDF6Q6KF10 455 aaPredicted RBP21.5■■□□□ 1.03
PSEN1-203ENST00000394157 RINT1Q6NUQ1 792 aa21.5■■□□□ 1.03
PSEN1-203ENST00000394157 KRBA2Q6ZNG9 492 aa21.5■■□□□ 1.03
PSEN1-203ENST00000394157 C1orf186Q6ZWK4 172 aa21.5■■□□□ 1.03
PSEN1-203ENST00000394157 ELOA2Q8IYF1 753 aaPredicted RBP21.5■■□□□ 1.03
PSEN1-203ENST00000394157 ZNF710Q8N1W2 664 aa21.5■■□□□ 1.03
PSEN1-203ENST00000394157 TCP11Q8WWU5 503 aa21.5■■□□□ 1.03
PSEN1-203ENST00000394157 PDLIM7Q9NR12 457 aa21.5■■□□□ 1.03
PSEN1-203ENST00000394157 TLR3O15455 904 aaKnown RBP21.49■■□□□ 1.03
PSEN1-203ENST00000394157 LIG1P18858 919 aa21.49■■□□□ 1.03
PSEN1-203ENST00000394157 GUCY2CP25092 1073 aa21.49■■□□□ 1.03
PSEN1-203ENST00000394157 EMC2Q15006 297 aa21.49■■□□□ 1.03
PSEN1-203ENST00000394157 PTGISQ16647 500 aa21.49■■□□□ 1.03
PSEN1-203ENST00000394157 SERINC5Q86VE9 423 aa21.49■■□□□ 1.03
PSEN1-203ENST00000394157 CNNM3Q8NE01 707 aa21.49■■□□□ 1.03
PSEN1-203ENST00000394157 TRAPPC12Q8WVT3 735 aa21.49■■□□□ 1.03
PSEN1-203ENST00000394157 MTRQ99707 1265 aa21.49■■□□□ 1.03
PSEN1-203ENST00000394157 SERTAD1Q9UHV2 236 aa21.49■■□□□ 1.03
PSEN1-203ENST00000394157 HOOK1Q9UJC3 728 aaKnown RBP21.49■■□□□ 1.03
PSEN1-203ENST00000394157 NOD1Q9Y239 953 aa21.49■■□□□ 1.03
PSEN1-203ENST00000394157 SMIM35A0A1B0GVV1 85 aa21.48■■□□□ 1.03
PSEN1-203ENST00000394157 DCDC2CA8MYV0 355 aa21.48■■□□□ 1.03
PSEN1-203ENST00000394157 USO1O60763 962 aaKnown RBP21.48■■□□□ 1.03
PSEN1-203ENST00000394157 NR1I2O75469 434 aa21.48■■□□□ 1.03
PSEN1-203ENST00000394157 PTK7Q13308 1070 aa21.48■■□□□ 1.03
PSEN1-203ENST00000394157 CNNM4Q6P4Q7 775 aa21.48■■□□□ 1.03
PSEN1-203ENST00000394157 GPBP1Q86WP2 473 aa21.48■■□□□ 1.03
PSEN1-203ENST00000394157 FAM126BQ8IXS8 530 aa21.48■■□□□ 1.03
PSEN1-203ENST00000394157 NME8Q8N427 588 aa21.48■■□□□ 1.03
PSEN1-203ENST00000394157 LINC01465Q8N7H1 131 aa21.48■■□□□ 1.03
PSEN1-203ENST00000394157 SH2D3AQ9BRG2 576 aa21.48■■□□□ 1.03
PSEN1-203ENST00000394157 TREHO43280 583 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 CD4P01730 458 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 CYP2C9P11712 490 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 ATN1P54259 1190 aaPredicted RBP21.47■■□□□ 1.03
PSEN1-203ENST00000394157 CDC42EP1Q00587 391 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 HIC1Q14526 733 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 DHX8Q14562 1220 aaKnown RBP21.47■■□□□ 1.03
PSEN1-203ENST00000394157 IER5Q5VY09 327 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 EFCAB12Q6NXP0 572 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 RPAINQ86UA6 219 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 RSPH3Q86UC2 560 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 KIFAP3Q92845 792 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 PAGE5Q96GU1 130 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 DRC1Q96MC2 740 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 MAP7D2Q96T17 732 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 RUSC1Q9BVN2 902 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 DACT1Q9NYF0 836 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 ODF2LQ9ULJ1 636 aa21.47■■□□□ 1.03
PSEN1-203ENST00000394157 CAND2O75155 1236 aa21.46■■□□□ 1.03
PSEN1-203ENST00000394157 KRT18P05783 430 aaKnown RBP21.46■■□□□ 1.03
PSEN1-203ENST00000394157 SOX10P56693 466 aa21.46■■□□□ 1.03
PSEN1-203ENST00000394157 RTP1P59025 263 aa21.46■■□□□ 1.03
PSEN1-203ENST00000394157 ARSHQ5FYA8 562 aa21.46■■□□□ 1.03
PSEN1-203ENST00000394157 SH3RF1Q7Z6J0 888 aa21.46■■□□□ 1.03
PSEN1-203ENST00000394157 METTL13Q8N6R0 699 aa21.46■■□□□ 1.03
PSEN1-203ENST00000394157 PPP1R13LQ8WUF5 828 aa21.46■■□□□ 1.03
PSEN1-203ENST00000394157 C7orf25Q9BPX7 421 aa21.46■■□□□ 1.03
PSEN1-203ENST00000394157 SUGCTQ9HAC7 445 aa21.46■■□□□ 1.03
PSEN1-203ENST00000394157 C17orf75Q9HAS0 396 aa21.46■■□□□ 1.03
PSEN1-203ENST00000394157 XPNPEP1Q9NQW7 623 aa21.46■■□□□ 1.03
PSEN1-203ENST00000394157 TRMT13Q9NUP7 481 aaKnown RBP21.46■■□□□ 1.03
PSEN1-203ENST00000394157 KCNG1Q9UIX4 513 aa21.46■■□□□ 1.03
PSEN1-203ENST00000394157 ASAP2O43150 1006 aa21.45■■□□□ 1.02
PSEN1-203ENST00000394157 B4GALT4O60513 344 aa21.45■■□□□ 1.02
PSEN1-203ENST00000394157 ZNF200P98182 395 aaPredicted RBP21.45■■□□□ 1.02
PSEN1-203ENST00000394157 MXD4Q14582 209 aaPredicted RBP21.45■■□□□ 1.02
PSEN1-203ENST00000394157 TRIM60Q495X7 471 aa21.45■■□□□ 1.02
PSEN1-203ENST00000394157 CCDC155Q8N6L0 562 aa21.45■■□□□ 1.02
PSEN1-203ENST00000394157 PSPC1Q8WXF1 523 aaKnown RBP21.45■■□□□ 1.02
PSEN1-203ENST00000394157 DDX12PQ92771 950 aa21.45■■□□□ 1.02
PSEN1-203ENST00000394157 CTAGE1Q96RT6 745 aa21.45■■□□□ 1.02
PSEN1-203ENST00000394157 HTATIP2Q9BUP3 242 aa21.45■■□□□ 1.02
PSEN1-203ENST00000394157 TRIM9Q9C026 710 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms