RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 PPP1R12BO60237 982 aaPredicted RBP12.15□□□□□ -0.46
CUX1-204ENST00000393824 PEX10O60683 326 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 ECM2O94769 699 aaPredicted RBP12.15□□□□□ -0.46
CUX1-204ENST00000393824 HEXIM1O94992 359 aaKnown RBP12.15□□□□□ -0.46
CUX1-204ENST00000393824 MOCS3O95396 460 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 GNAQP50148 359 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 CCNHP51946 323 aaPredicted RBP12.15□□□□□ -0.46
CUX1-204ENST00000393824 TTLL12Q14166 644 aaPredicted RBP12.15□□□□□ -0.46
CUX1-204ENST00000393824 CST9Q5W186 159 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 CCT6BQ92526 530 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 MTMR8Q96EF0 704 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 DHTKD1Q96HY7 919 aaPredicted RBP12.15□□□□□ -0.46
CUX1-204ENST00000393824 FAM210AQ96ND0 272 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 KIAA1683Q9H0B3 1180 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 MLXIPQ9HAP2 919 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 PICK1Q9NRD5 415 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 AFG3L2Q9Y4W6 797 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 PES1O00541 588 aaKnown RBP12.15□□□□□ -0.46
CUX1-204ENST00000393824 PSMA7O14818 248 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 ITGBL1O95965 494 aaPredicted RBP12.15□□□□□ -0.46
CUX1-204ENST00000393824 SSBP05455 408 aaKnown RBP eCLIP12.15□□□□□ -0.46
CUX1-204ENST00000393824 CXCR5P32302 372 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 GJA5P36382 358 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 PMS1P54277 932 aaKnown RBP12.15□□□□□ -0.46
CUX1-204ENST00000393824 BACE1P56817 501 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 RIPK1Q13546 671 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 BYSLQ13895 437 aaKnown RBP12.15□□□□□ -0.46
CUX1-204ENST00000393824 NAA25Q14CX7 972 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 QRICH1Q2TAL8 776 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 ZC3H12AQ5D1E8 599 aaKnown RBP12.15□□□□□ -0.46
CUX1-204ENST00000393824 NOL9Q5SY16 702 aaKnown RBP12.15□□□□□ -0.46
CUX1-204ENST00000393824 FAM114A1Q8IWE2 563 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 CACNA2D3Q8IZS8 1091 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 OTUD5Q96G74 571 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 ERGIC2Q96RQ1 377 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 TUBGCP2Q9BSJ2 902 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 GOPCQ9HD26 462 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 SMARCAL1Q9NZC9 954 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 EHD2Q9NZN4 543 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 PRR12Q9ULL5 1215 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 MAPK8IP1Q9UQF2 711 aa12.15□□□□□ -0.46
CUX1-204ENST00000393824 GOLGA6L10A6NI86 522 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 B4DLN1 442 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 ATP6V1G2O95670 118 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 CALML3P27482 149 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 ELF3P78545 371 aaPredicted RBP12.14□□□□□ -0.47
CUX1-204ENST00000393824 GUCY2DQ02846 1103 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 IKQ13123 557 aaPredicted RBP12.14□□□□□ -0.47
CUX1-204ENST00000393824 BIRC3Q13489 604 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 QPCTQ16769 361 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 POTEEQ6S8J3 1075 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 LDHDQ86WU2 507 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 CUL5Q93034 780 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 TATDN2Q93075 761 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 MAGEF1Q9HAY2 307 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 NOD2Q9HC29 1040 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 BARHL2Q9NY43 387 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 PLAAQ9Y263 795 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 H0YGN5 161 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 GCOM1H8Y6P7 765 aaPredicted RBP12.14□□□□□ -0.47
CUX1-204ENST00000393824 RHOBTB3O94955 611 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 MYZAPP0CAP1 466 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 IBSPP21815 317 aaPredicted RBP12.14□□□□□ -0.47
CUX1-204ENST00000393824 SLMAPQ14BN4 828 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 TREML2Q5T2D2 321 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 TTI2Q6NXR4 508 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 RNF10Q8N5U6 811 aaKnown RBP12.14□□□□□ -0.47
CUX1-204ENST00000393824 CASKIN2Q8WXE0 1202 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 IFT81Q8WYA0 676 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 WDR18Q9BV38 432 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 CUEDC2Q9H467 287 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 ARHGAP20Q9P2F6 1191 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 NFS1Q9Y697 457 aa12.14□□□□□ -0.47
CUX1-204ENST00000393824 MYH10P35580 1976 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 BICDL2A1A5D9 508 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 GRID2IPA4D2P6 1211 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 ZBTB5O15062 677 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 RPSAP08865 295 aaKnown RBP12.13□□□□□ -0.47
CUX1-204ENST00000393824 STAT6P42226 847 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 STAT2P52630 851 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 IL17AQ16552 155 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 FKBP15Q5T1M5 1219 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 GKAP1Q5VSY0 366 aaPredicted RBP12.13□□□□□ -0.47
CUX1-204ENST00000393824 SYDE2Q5VT97 1194 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 KLHDC7AQ5VTJ3 777 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 BTNL9Q6UXG8 535 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 C4orf32Q8N8J7 132 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 GIMAP8Q8ND71 665 aaPredicted RBP12.13□□□□□ -0.47
CUX1-204ENST00000393824 P2RX7Q99572 595 aaKnown RBP12.13□□□□□ -0.47
CUX1-204ENST00000393824 LZTS2Q9BRK4 669 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 RPAP3Q9H6T3 665 aaPredicted RBP12.13□□□□□ -0.47
CUX1-204ENST00000393824 SH3GLB2Q9NR46 395 aa12.13□□□□□ -0.47
CUX1-204ENST00000393824 ESYT3A0FGR9 886 aa12.12□□□□□ -0.47
CUX1-204ENST00000393824 ZSCAN5CA6NGD5 496 aaPredicted RBP12.12□□□□□ -0.47
CUX1-204ENST00000393824 M0R2N6 131 aa12.12□□□□□ -0.47
CUX1-204ENST00000393824 OPLAHO14841 1288 aa12.12□□□□□ -0.47
CUX1-204ENST00000393824 CELF2O95319 508 aaKnown RBP12.12□□□□□ -0.47
CUX1-204ENST00000393824 PLEKP08567 350 aaPredicted RBP12.12□□□□□ -0.47
CUX1-204ENST00000393824 HPDP32754 393 aaPredicted RBP12.12□□□□□ -0.47
CUX1-204ENST00000393824 GUCY2FP51841 1108 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms