RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 CHMP6Q96FZ7 201 aa12.44□□□□□ -0.42
PDCD4-202ENST00000393104 PBKQ96KB5 322 aa12.44□□□□□ -0.42
PDCD4-202ENST00000393104 PSMD1Q99460 953 aa12.44□□□□□ -0.42
PDCD4-202ENST00000393104 TBC1D7Q9P0N9 293 aa12.44□□□□□ -0.42
PDCD4-202ENST00000393104 SUGT1Q9Y2Z0 365 aa12.44□□□□□ -0.42
PDCD4-202ENST00000393104 SIPA1L1O43166 1804 aa12.44□□□□□ -0.42
PDCD4-202ENST00000393104 PPEF1O14829 653 aaPredicted RBP12.43□□□□□ -0.42
PDCD4-202ENST00000393104 KIAA0391O15091 583 aaKnown RBP12.43□□□□□ -0.42
PDCD4-202ENST00000393104 ASAP2O43150 1006 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 GPSM2P81274 684 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 DHX9Q08211 1270 aaKnown RBP12.43□□□□□ -0.42
PDCD4-202ENST00000393104 MPP2Q14168 576 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 RPS6KA1Q15418 735 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 SPTY2D1Q68D10 685 aaPredicted RBP12.43□□□□□ -0.42
PDCD4-202ENST00000393104 CCDC121Q6ZUS5 278 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 UTP4Q969X6 686 aaKnown RBP12.43□□□□□ -0.42
PDCD4-202ENST00000393104 CEP63Q96MT8 703 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 E9PMD0 336 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 SLC12A3P55017 1021 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 NCALDP61601 193 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 CRYMQ14894 314 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 ZNF804AQ7Z570 1209 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 MYOCDQ8IZQ8 938 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 AGAP11Q8TF27 550 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 CUL5Q93034 780 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 CRNKL1Q9BZJ0 848 aaKnown RBP12.43□□□□□ -0.42
PDCD4-202ENST00000393104 ADAMTSL1Q8N6G6 1762 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 USP17L5A8MUK1 530 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 CEP104O60308 925 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 IBSPP21815 317 aaPredicted RBP12.43□□□□□ -0.42
PDCD4-202ENST00000393104 CDC25CP30307 473 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 PTENP60484 403 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 KCNA1Q09470 495 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 KLHL30Q0D2K2 578 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 RAPGEF1Q13905 1077 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 DIXDC1Q155Q3 683 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 CACNA2D4Q7Z3S7 1137 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 CRYGNQ8WXF5 182 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 PGM2Q96G03 612 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 ARHGEF10LQ9HCE6 1279 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 AAASQ9NRG9 546 aa12.43□□□□□ -0.42
PDCD4-202ENST00000393104 ZMYM2Q9UBW7 1377 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 EME2A4GXA9 379 aaPredicted RBP12.42□□□□□ -0.42
PDCD4-202ENST00000393104 PGRMC1O00264 195 aaKnown RBP12.42□□□□□ -0.42
PDCD4-202ENST00000393104 CYP11B2P19099 503 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 VCAM1P19320 739 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 TNNC1P63316 161 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 CC2D2BQ6DHV5 1058 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 SPICE1Q8N0Z3 855 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 BANK1Q8NDB2 785 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 WDR66Q8TBY9 1149 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 COA7Q96BR5 231 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 ARHGEF26Q96DR7 871 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 UBA5Q9GZZ9 404 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 VEZTQ9HBM0 779 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 TAS2R14Q9NYV8 317 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 PRKAG3Q9UGI9 489 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 BUB1BO60566 1050 aaPredicted RBP12.42□□□□□ -0.42
PDCD4-202ENST00000393104 AKAP3O75969 853 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 MMP10P09238 476 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 SNHG28P0DPA3 235 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 NAPAP54920 295 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 AMPD3Q01432 767 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 SIX1Q15475 284 aaPredicted RBP12.42□□□□□ -0.42
PDCD4-202ENST00000393104 SPDYCQ5MJ68 293 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 CACNA2D3Q8IZS8 1091 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 PRCCQ92733 491 aaPredicted RBP12.42□□□□□ -0.42
PDCD4-202ENST00000393104 SLC5A4Q9NY91 659 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 GGA1Q9UJY5 639 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 FER1L6Q2WGJ9 1857 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 A0A0A6YYK5 440 aaPredicted RBP12.42□□□□□ -0.42
PDCD4-202ENST00000393104 TMCO5BA8MYB1 307 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 ALAS1P13196 640 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 PSMC6P62333 389 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 SF3A3Q12874 501 aaKnown RBP eCLIP12.42□□□□□ -0.42
PDCD4-202ENST00000393104 ORC2Q13416 577 aaPredicted RBP12.42□□□□□ -0.42
PDCD4-202ENST00000393104 ENOX2Q16206 610 aaKnown RBP12.42□□□□□ -0.42
PDCD4-202ENST00000393104 CALCRLQ16602 461 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 CRELD2Q6UXH1 353 aaPredicted RBP12.42□□□□□ -0.42
PDCD4-202ENST00000393104 TAX1BP1Q86VP1 789 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 CPNE8Q86YQ8 564 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 TEX11Q8IYF3 940 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 UBLCP1Q8WVY7 318 aaPredicted RBP12.42□□□□□ -0.42
PDCD4-202ENST00000393104 NUCKS1Q9H1E3 243 aaKnown RBP12.42□□□□□ -0.42
PDCD4-202ENST00000393104 SLITRK6Q9H5Y7 841 aa12.42□□□□□ -0.42
PDCD4-202ENST00000393104 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
PDCD4-202ENST00000393104 TRAF5O00463 557 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 CASP4P49662 377 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 NBPF9Q3BBW0 867 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 ALKBH5Q6P6C2 394 aaKnown RBP12.41□□□□□ -0.42
PDCD4-202ENST00000393104 NELFCDQ8IXH7 590 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 CENPHQ9H3R5 247 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 SEMA4AQ9H3S1 761 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 ASTN1O14525 1302 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 NCANO14594 1321 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 TCRBV7S2A1N4TA0A589 114 aa12.41□□□□□ -0.42
PDCD4-202ENST00000393104 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
PDCD4-202ENST00000393104 HLTFQ14527 1009 aaKnown RBP eCLIP12.41□□□□□ -0.42
PDCD4-202ENST00000393104 BZW1Q7L1Q6 419 aaKnown RBP12.41□□□□□ -0.42
PDCD4-202ENST00000393104 CEP57Q86XR8 500 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms