RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 ATP6V1G3Q96LB4 118 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 GRIN2DO15399 1336 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 PVALEFA0A1B0GWK0 134 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 RBAK-RBAKDNI3L0D1 243 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 MEFVO15553 781 aaPredicted RBP11.82□□□□□ -0.52
BRF1-204ENST00000392557 MED24O75448 989 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 MAP2K2P36507 400 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 GLE1Q53GS7 698 aaKnown RBP11.82□□□□□ -0.52
BRF1-204ENST00000392557 ARFGAP2Q8N6H7 521 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 GIMAP7Q8NHV1 300 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 BAP1Q92560 729 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 SELENOSQ9BQE4 189 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 GLT8D2Q9H1C3 349 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 PIM2Q9P1W9 311 aa11.82□□□□□ -0.52
BRF1-204ENST00000392557 NOVA2Q9UNW9 492 aaKnown RBP11.82□□□□□ -0.52
BRF1-204ENST00000392557 MYH7BA7E2Y1 1941 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 DDX39AO00148 427 aaKnown RBP11.81□□□□□ -0.52
BRF1-204ENST00000392557 EGFRP00533 1210 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 VIL1P09327 827 aaKnown RBP11.81□□□□□ -0.52
BRF1-204ENST00000392557 ORC2Q13416 577 aaPredicted RBP11.81□□□□□ -0.52
BRF1-204ENST00000392557 GMCL1P1Q8NEA9 526 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 ZNF341Q9BYN7 854 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 EPN3Q9H201 632 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 AMACRQ9UHK6 382 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 PCDHB13Q9Y5F0 798 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 A6NNZ2 444 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 KCNA3P22001 575 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 PSMC6P62333 389 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 KCNMA1Q12791 1236 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 KCNH2Q12809 1159 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 TUBB8Q3ZCM7 444 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 PRAMEF18Q5VWM3 479 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 U2AF1L4Q8WU68 220 aaKnown RBP11.81□□□□□ -0.52
BRF1-204ENST00000392557 GMCL1Q96IK5 515 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 NUCKS1Q9H1E3 243 aaKnown RBP11.81□□□□□ -0.52
BRF1-204ENST00000392557 EMILIN3Q9NT22 766 aa11.81□□□□□ -0.52
BRF1-204ENST00000392557 WNT10BO00744 389 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 SLC9A1P19634 815 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 SLC18A3Q16572 532 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 CIAPIN1Q6FI81 312 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 SAMD7Q7Z3H4 446 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 LRRC45Q96CN5 670 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 FGFBP2Q9BYJ0 223 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 NT5C3AQ9H0P0 336 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 RGL1Q9NZL6 768 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 FZD1Q9UP38 647 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 ATP8A1Q9Y2Q0 1164 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 SSU72P8A0A1W2PR75 194 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 CLIC2O15247 247 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 KRT13P13646 458 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 MDH1P40925 334 aaKnown RBP11.8□□□□□ -0.52
BRF1-204ENST00000392557 USP11P51784 963 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 ACTN3Q08043 901 aaPredicted RBP11.8□□□□□ -0.52
BRF1-204ENST00000392557 RASA3Q14644 834 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 PLS1Q14651 629 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 SPDYE2Q495Y8 402 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 WHAMMQ8TF30 809 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 CAVIN3Q969G5 261 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 SH3GL2Q99962 352 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 TAOK3Q9H2K8 898 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 RNF14Q9UBS8 474 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 ARMCX3Q9UH62 379 aaPredicted RBP11.8□□□□□ -0.52
BRF1-204ENST00000392557 SFI1A8K8P3 1242 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 DAPK3O43293 454 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 CLSTN1O94985 981 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 PTK2Q05397 1052 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 AP3B2Q13367 1082 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 NAB2Q15742 525 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 IFI16Q16666 785 aaKnown RBP11.8□□□□□ -0.52
BRF1-204ENST00000392557 DALRD3Q5D0E6 543 aaKnown RBP11.8□□□□□ -0.52
BRF1-204ENST00000392557 ALKBH5Q6P6C2 394 aaKnown RBP11.8□□□□□ -0.52
BRF1-204ENST00000392557 PIGOQ8TEQ8 1089 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 MYCBPQ99417 103 aaPredicted RBP11.8□□□□□ -0.52
BRF1-204ENST00000392557 PSMD1Q99460 953 aa11.8□□□□□ -0.52
BRF1-204ENST00000392557 TAF1DQ9H5J8 278 aaPredicted RBP11.8□□□□□ -0.52
BRF1-204ENST00000392557 TMEM110-MUSTN1A8MSY1 372 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 SART1O43290 800 aaKnown RBP11.79□□□□□ -0.52
BRF1-204ENST00000392557 TLR2O60603 784 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 DHX9Q08211 1270 aaKnown RBP11.79□□□□□ -0.52
BRF1-204ENST00000392557 CTTNQ14247 550 aaKnown RBP11.79□□□□□ -0.52
BRF1-204ENST00000392557 PTGISQ16647 500 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 LRRC55Q6ZSA7 311 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 MAEAQ7L5Y9 396 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 TPH2Q8IWU9 490 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 SLFN12Q8IYM2 578 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 ERMNQ8TAM6 284 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 CD248Q9HCU0 757 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 FBXL5Q9UKA1 691 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 KDM3AQ9Y4C1 1321 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 HMGB1P1B2RPK0 211 aaPredicted RBP11.79□□□□□ -0.52
BRF1-204ENST00000392557 XRCC5P13010 732 aaKnown RBP11.79□□□□□ -0.52
BRF1-204ENST00000392557 HNRNPH3P31942 346 aaKnown RBP11.79□□□□□ -0.52
BRF1-204ENST00000392557 LLGL1Q15334 1064 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 EXOC3L4Q17RC7 722 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 HGSNATQ68CP4 663 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 CATSPER3Q86XQ3 398 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 USP38Q8NB14 1042 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 MYCBPAPQ8TBZ2 947 aa11.79□□□□□ -0.52
BRF1-204ENST00000392557 CELF4Q9BZC1 486 aaKnown RBP11.79□□□□□ -0.52
BRF1-204ENST00000392557 MYOZ2Q9NPC6 264 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms