RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 FSTL1Q12841 308 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 ITGB3BPQ13352 177 aaPredicted RBP21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 SAMD3Q8N6K7 520 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 SMCR8Q8TEV9 937 aaPredicted RBP21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 DYDC2Q96IM9 177 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 TSGA10Q9BZW7 698 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 NHEJ1Q9H9Q4 299 aaPredicted RBP21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 HDAC6Q9UBN7 1215 aa21.85■■□□□ 1.09
CSNK1D-203ENST00000392334 PES1O00541 588 aaKnown RBP21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 ZBTB39O15060 712 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 ATP9AO75110 1047 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 IPO7O95373 1038 aaKnown RBP21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 TRIM21P19474 475 aaKnown RBP21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 TBC1D8BQ0IIM8 1120 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 STK4Q13043 487 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 PPP2R5CQ13362 524 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 PAXIP1Q6ZW49 1069 aaPredicted RBP21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 ANKRD23Q86SG2 305 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 NSUN6Q8TEA1 469 aaKnown RBP21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 CCDC102AQ96A19 550 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 CNOT6LQ96LI5 555 aaKnown RBP21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 TEKT3Q9BXF9 490 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 AGO4Q9HCK5 861 aaKnown RBP21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 AGPAT5Q9NUQ2 364 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 FRMPD4Q14CM0 1322 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 IGF2BP3O00425 579 aaKnown RBP eCLIP21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 ENC1O14682 589 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 SLITRK3O94933 977 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 HNRNPH3P31942 346 aaKnown RBP21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 MIIPQ5JXC2 388 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 CYP4F22Q6NT55 531 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 RIOX2Q8IUF8 465 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 PIGOQ8TEQ8 1089 aa21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 MOV10L1Q9BXT6 1211 aaKnown RBP21.84■■□□□ 1.09
CSNK1D-203ENST00000392334 ERCC3P19447 782 aa21.83■■□□□ 1.09
CSNK1D-203ENST00000392334 VAV2P52735 878 aa21.83■■□□□ 1.09
CSNK1D-203ENST00000392334 VSIG10LQ86VR7 867 aa21.83■■□□□ 1.09
CSNK1D-203ENST00000392334 CHST13Q8NET6 341 aa21.83■■□□□ 1.09
CSNK1D-203ENST00000392334 RUBCNQ92622 972 aa21.83■■□□□ 1.09
CSNK1D-203ENST00000392334 POLD4Q9HCU8 107 aa21.83■■□□□ 1.09
CSNK1D-203ENST00000392334 SLC39A2Q9NP94 309 aa21.83■■□□□ 1.09
CSNK1D-203ENST00000392334 FEZ2Q9UHY8 353 aaPredicted RBP21.83■■□□□ 1.09
CSNK1D-203ENST00000392334 PNMA3Q9UL41 463 aa21.83■■□□□ 1.09
CSNK1D-203ENST00000392334 DNM3Q9UQ16 869 aa21.83■■□□□ 1.09
CSNK1D-203ENST00000392334 SORBS3O60504 671 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 CCND2P30279 289 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 WDR78Q5VTH9 848 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 ANKRD40Q6AI12 368 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 IQCEQ6IPM2 695 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 ZNF572Q7Z3I7 529 aaPredicted RBP21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 GPBP1Q86WP2 473 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 BANK1Q8NDB2 785 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 HSD17B14Q9BPX1 270 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 LACRTQ9GZZ8 138 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 WRAP73Q9P2S5 460 aaPredicted RBP21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 HPCAL4Q9UM19 191 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 SAMM50Q9Y512 469 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 RBBP6Q7Z6E9 1792 aaKnown RBP21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 RCCD1A6NED2 376 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 DHX15O43143 795 aaKnown RBP21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 BCRP11274 1271 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 ITIH3Q06033 890 aa21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 TRMT1LQ7Z2T5 733 aaKnown RBP21.82■■□□□ 1.08
CSNK1D-203ENST00000392334 ASTN1O14525 1302 aa21.81■■□□□ 1.08
CSNK1D-203ENST00000392334 SYF2O95926 243 aaKnown RBP21.81■■□□□ 1.08
CSNK1D-203ENST00000392334 SLC12A3P55017 1021 aa21.81■■□□□ 1.08
CSNK1D-203ENST00000392334 ANKRD13CQ8N6S4 541 aa21.81■■□□□ 1.08
CSNK1D-203ENST00000392334 COG1Q8WTW3 980 aa21.81■■□□□ 1.08
CSNK1D-203ENST00000392334 RIT2Q99578 217 aa21.81■■□□□ 1.08
CSNK1D-203ENST00000392334 BHMT2Q9H2M3 363 aa21.81■■□□□ 1.08
CSNK1D-203ENST00000392334 BCAS3Q9H6U6 928 aa21.81■■□□□ 1.08
CSNK1D-203ENST00000392334 SLC45A1Q9Y2W3 748 aa21.81■■□□□ 1.08
CSNK1D-203ENST00000392334 MANSC4A6NHS7 340 aaPredicted RBP21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 PRPF6O94906 941 aaKnown RBP21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 MTIF2P46199 727 aaKnown RBP21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 FKBP15Q5T1M5 1219 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 CNNM4Q6P4Q7 775 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 POLR3CQ9BUI4 534 aaPredicted RBP21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 NOC4LQ9BVI4 516 aaKnown RBP21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 TBC1D7Q9P0N9 293 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 TFR2Q9UP52 801 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 SRGAP2O75044 1071 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 RGS20O76081 388 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 KRT18P05783 430 aaKnown RBP21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 PGK2P07205 417 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 PRLRP16471 622 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 CYP11B2P19099 503 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 KIF5AQ12840 1032 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 ARSHQ5FYA8 562 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 UNC13DQ70J99 1090 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 NIPA1Q7RTP0 329 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 MIER3Q7Z3K6 550 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 GLIS3Q8NEA6 775 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 DNAJC19Q96DA6 116 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 EEF2KMTQ96G04 330 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 ZHX3Q9H4I2 956 aa21.8■■□□□ 1.08
CSNK1D-203ENST00000392334 LCA5LO95447 670 aa21.79■■□□□ 1.08
CSNK1D-203ENST00000392334 KLK7P49862 253 aa21.79■■□□□ 1.08
CSNK1D-203ENST00000392334 ERVK-9P63128 1117 aa21.79■■□□□ 1.08
CSNK1D-203ENST00000392334 CENPPQ6IPU0 288 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms