RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 VAMP7P51809 220 aa17.88■□□□□ 0.45
SNX9-201ENST00000392185 SPOUT1Q5T280 376 aaKnown RBP17.88■□□□□ 0.45
SNX9-201ENST00000392185 C15orf52Q6ZUT6 534 aaKnown RBP17.88■□□□□ 0.45
SNX9-201ENST00000392185 ADAMTSL3P82987 1691 aa17.88■□□□□ 0.45
SNX9-201ENST00000392185 RSPH10B2B2RC85 870 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 ICAM1P05362 532 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 RSPH10BP0C881 870 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 POLR2BP30876 1174 aaKnown RBP17.87■□□□□ 0.45
SNX9-201ENST00000392185 ZRSR2Q15696 482 aaKnown RBP17.87■□□□□ 0.45
SNX9-201ENST00000392185 ZNF568Q3ZCX4 644 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 FAM83AQ86UY5 434 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 A0A1B0GTH6 734 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 FOXP2O15409 715 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 SRGAP2O75044 1071 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 GAS8O95995 478 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 MYL3P08590 195 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 MAPK4P31152 587 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 SNX16P57768 344 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 SF3A3Q12874 501 aaKnown RBP eCLIP17.87■□□□□ 0.455e-6■■■■■ 39.5
SNX9-201ENST00000392185 SHROOM1Q2M3G4 852 aaPredicted RBP17.87■□□□□ 0.45
SNX9-201ENST00000392185 RNF149Q8NC42 400 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 FAM76AQ8TAV0 307 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 FAM167AQ96KS9 214 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 EMSYQ7Z589 1322 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 PPP1R3GB7ZBB8 358 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 SLFN12LQ6IEE8 588 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 PPP1R21Q6ZMI0 780 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 CEP72Q9P209 647 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 CAPN9O14815 690 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 ABL1P00519 1130 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 PPP2R5DQ14738 602 aa17.87■□□□□ 0.45
SNX9-201ENST00000392185 DRAP1Q14919 205 aaPredicted RBP17.87■□□□□ 0.45
SNX9-201ENST00000392185 RNF8O76064 485 aa17.86■□□□□ 0.45
SNX9-201ENST00000392185 BSPRYQ5W0U4 402 aa17.86■□□□□ 0.45
SNX9-201ENST00000392185 LRRC45Q96CN5 670 aa17.86■□□□□ 0.45
SNX9-201ENST00000392185 LIMA1Q9UHB6 759 aaKnown RBP17.86■□□□□ 0.45
SNX9-201ENST00000392185 SEC31AO94979 1220 aaKnown RBP17.86■□□□□ 0.45
SNX9-201ENST00000392185 TAF1CQ15572 869 aaPredicted RBP17.86■□□□□ 0.45
SNX9-201ENST00000392185 PASD1Q8IV76 773 aa17.86■□□□□ 0.45
SNX9-201ENST00000392185 STAM2O75886 525 aa17.86■□□□□ 0.45
SNX9-201ENST00000392185 ACTN1P12814 892 aa17.86■□□□□ 0.45
SNX9-201ENST00000392185 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.86■□□□□ 0.45
SNX9-201ENST00000392185 MAGOHBQ96A72 148 aaKnown RBP17.86■□□□□ 0.45
SNX9-201ENST00000392185 PHLPP2Q6ZVD8 1323 aa17.86■□□□□ 0.45
SNX9-201ENST00000392185 CCL15-CCL14A0A0B4J2E2 113 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 HUNKP57058 714 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 CCL15Q16663 113 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 TCP11Q8WWU5 503 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 GLIS2Q9BZE0 524 aaPredicted RBP17.85■□□□□ 0.45
SNX9-201ENST00000392185 PDGFDQ9GZP0 370 aaPredicted RBP17.85■□□□□ 0.45
SNX9-201ENST00000392185 NACA2Q9H009 215 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 PDXKO00764 312 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 CYP11B2P19099 503 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 CAPN12Q6ZSI9 719 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 EXOC8Q8IYI6 725 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 ARFGAP2Q8N6H7 521 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 FUCA2Q9BTY2 467 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 RAB20Q9NX57 234 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 TXNDC16Q9P2K2 825 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 JRKLQ9Y4A0 524 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 HOXA7P31268 230 aaPredicted RBP17.85■□□□□ 0.45
SNX9-201ENST00000392185 ACOT2P49753 483 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 C2orf54Q08AI8 447 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 SNAPC2Q13487 334 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 KRT71Q3SY84 523 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 RSPH3Q86UC2 560 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 CCDC63Q8NA47 563 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 RIT2Q99578 217 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 PPP1R9AQ9ULJ8 1098 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 PTPN22Q9Y2R2 807 aa17.85■□□□□ 0.45
SNX9-201ENST00000392185 XKR3Q5GH77 459 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 RABGGTAQ92696 567 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 KIFC3Q9BVG8 833 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 KLK7P49862 253 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 NR1I3Q14994 352 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 MAP1SQ66K74 1059 aaPredicted RBP17.84■□□□□ 0.45
SNX9-201ENST00000392185 CCDC125Q86Z20 511 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 SEPT1Q8WYJ6 367 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 NUDT12Q9BQG2 462 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 AP5Z1O43299 807 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 SREBF1P36956 1147 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 PRKCEQ02156 737 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 ANKS1AQ92625 1134 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 GPRC5CQ9NQ84 441 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 ZNF148Q9UQR1 794 aa17.84■□□□□ 0.45
SNX9-201ENST00000392185 A0A087X0B3 334 aa17.83■□□□□ 0.45
SNX9-201ENST00000392185 TNPO2O14787 897 aaKnown RBP17.83■□□□□ 0.45
SNX9-201ENST00000392185 PGK2P07205 417 aa17.83■□□□□ 0.45
SNX9-201ENST00000392185 OAS2P29728 719 aaKnown RBP17.83■□□□□ 0.45
SNX9-201ENST00000392185 CCZ1BP86790 482 aa17.83■□□□□ 0.45
SNX9-201ENST00000392185 CCZ1P86791 482 aaPredicted RBP17.83■□□□□ 0.45
SNX9-201ENST00000392185 BRD3Q15059 726 aa17.83■□□□□ 0.45
SNX9-201ENST00000392185 E4F1Q66K89 784 aaPredicted RBP17.83■□□□□ 0.45
SNX9-201ENST00000392185 TMEM270Q6UE05 265 aa17.83■□□□□ 0.45
SNX9-201ENST00000392185 GLYCTKQ8IVS8 523 aa17.83■□□□□ 0.45
SNX9-201ENST00000392185 ADARB2Q9NS39 739 aaKnown RBP17.83■□□□□ 0.45
SNX9-201ENST00000392185 GOLGA6CA6NDK9 693 aa17.83■□□□□ 0.45
SNX9-201ENST00000392185 DYNC1LI2O43237 492 aaPredicted RBP17.83■□□□□ 0.45
SNX9-201ENST00000392185 GRIN3BO60391 1043 aa17.83■□□□□ 0.45
SNX9-201ENST00000392185 GOLGA6DP0CG33 693 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms