RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 FRMD5Q7Z6J6 570 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 MORC4Q8TE76 937 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 SYNGAP1Q96PV0 1343 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 FAM184BQ9ULE4 1060 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 TELO2Q9Y4R8 837 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 A0A1W2PQJ5 194 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 RASSF10A6NK89 507 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 SOCS7O14512 581 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 FARP2O94887 1054 aaPredicted RBP12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 KRT9P35527 623 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 GCLCP48506 637 aaPredicted RBP12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 NPEPPSP55786 919 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 KCNV1Q6PIU1 500 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 NYAP1Q6ZVC0 841 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 SLC17A8Q8NDX2 589 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 PPP1R13BQ96KQ4 1090 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 DNAJC7Q99615 494 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 PORCNQ9H237 461 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 ST6GALNAC4Q9H4F1 302 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 SIK3Q9Y2K2 1263 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 LUC7L2Q9Y383 392 aaKnown RBP12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 MAFBQ9Y5Q3 323 aaPredicted RBP12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 MCM3APO60318 1980 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 IGKV6D-21A0A0A0MT36 114 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 TRIM21P19474 475 aaKnown RBP12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 PRKCEQ02156 737 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 SP4Q02446 784 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 MAEAQ7L5Y9 396 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 GOLGA5Q8TBA6 731 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 CEP170P1Q96L14 293 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 C16orf45Q96MC5 204 aaPredicted RBP12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 SH2D3AQ9BRG2 576 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 TRMT1Q9NXH9 659 aaKnown RBP12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 MORF4L1Q9UBU8 362 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 K7ENM7 598 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 PPP2R3AQ06190 1150 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 XKR3Q5GH77 459 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 WDR78Q5VTH9 848 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 TMTC1Q8IUR5 882 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 OR8K1Q8NGG5 319 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 GBP3Q9H0R5 595 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 EFCC1Q9HA90 598 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 METTL14Q9HCE5 456 aaKnown RBP12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 ZNF302Q9NR11 478 aa12.59□□□□□ -0.39
SMARCAL1-203ENST00000392128 ZSCAN12O43309 604 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 DGAT1O75907 488 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 KLK7P49862 253 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 NCKAP1LP55160 1127 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 METTL7BQ6UX53 244 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 HS2ST1Q7LGA3 356 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 TMEM174Q8WUU8 243 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 KIFAP3Q92845 792 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 PCMTD1Q96MG8 357 aaPredicted RBP12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 TMEM206Q9H813 350 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 C17orf75Q9HAS0 396 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 NMRK2Q9NPI5 230 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 PDLIM7Q9NR12 457 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 ARMCX3Q9UH62 379 aaPredicted RBP12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 SOWAHDA6NJG2 315 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 SORBS3O60504 671 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 AKAP3O75969 853 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 ITGBL1O95965 494 aaPredicted RBP12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 ZBED6P86452 979 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 GTF2BQ00403 316 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 MYBPC2Q14324 1141 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 PTPN14Q15678 1187 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 FAM102BQ5T8I3 360 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 CST9Q5W186 159 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 CYP26C1Q6V0L0 522 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 ABRAQ8N0Z2 381 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 ANKRD13CQ8N6S4 541 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 MCPH1Q8NEM0 835 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 ZNF526Q8TF50 670 aaPredicted RBP12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 PARK7Q99497 189 aaKnown RBP12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 MKNK1Q9BUB5 465 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 CYP26B1Q9NR63 512 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 AGPAT3Q9NRZ7 376 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 SEPT9Q9UHD8 586 aaPredicted RBP12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 DDX41Q9UJV9 622 aaKnown RBP12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 PPP2R2CQ9Y2T4 447 aa12.58□□□□□ -0.4
SMARCAL1-203ENST00000392128 GSTTP1A0A1W2PQM5 241 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 ASB14A6NK59 587 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 KIF2AO00139 706 aaPredicted RBP12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 CLIC2O15247 247 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 TNNT1P13805 278 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 RTP1P59025 263 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 TRMT1LQ7Z2T5 733 aaKnown RBP12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 SLC9A9Q8IVB4 645 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 KSR1Q8IVT5 923 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 GPRC5CQ9NQ84 441 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 DMAC2Q9NW81 257 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 CGNQ9P2M7 1197 aaKnown RBP12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 STRNO43815 780 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 GGPS1O95749 300 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 OATP04181 439 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 ATP4AP20648 1035 aa12.57□□□□□ -0.4
SMARCAL1-203ENST00000392128 SNRPFP62306 86 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms