RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 SPATA31A6Q5VVP1 1343 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 MROH5Q6ZUA9 1318 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 SPATA31A7Q8IWB4 1347 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 PCDH11XQ9BZA7 1347 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 PCDH11YQ9BZA8 1340 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 PSME4Q14997 1843 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ZNF638Q14966 1978 aaKnown RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 AHDC1Q5TGY3 1603 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 PVALEFA0A1B0GWK0 134 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ESYT2A0FGR8 921 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ENO4A6NNW6 628 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ANKRD63C9JTQ0 380 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 DDX3XO00571 662 aaKnown RBP eCLIP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 TRAFD1O14545 582 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 EVI5O60447 810 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ATP2C2O75185 946 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 RNF8O76064 485 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 EYA4O95677 639 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 AGTP01019 485 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 OR52Z1P0C646 297 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 T-ENOLP0DO92 83 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ACADSP16219 412 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 CREB1P16220 341 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 XBP1P17861 261 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 VCAM1P19320 739 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ATP4AP20648 1035 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ATP6V1C1P21283 382 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 SP100P23497 879 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 CALML3P27482 149 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 GBP2P32456 591 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 HOXD13P35453 343 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 GNAQP50148 359 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 HADHBP55084 474 aaKnown RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 NPEPPSP55786 919 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 CABP4P57796 275 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ASIC1P78348 528 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 SARNPP82979 210 aaKnown RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 PPARDQ03181 441 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 PTK2Q05397 1052 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 DHX9Q08211 1270 aaKnown RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 TRAF1Q13077 416 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ORC2Q13416 577 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 SNX1Q13596 522 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ACVR2BQ13705 512 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 MOGSQ13724 837 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 HLTFQ14527 1009 aaKnown RBP eCLIP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 SEPT2Q15019 361 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 TCEAL1Q15170 157 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 RPS6KA1Q15418 735 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ECM1Q16610 540 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 CCDC142Q17RM4 750 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 INF2Q27J81 1249 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 PARP6Q2NL67 630 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 SLC9C1Q4G0N8 1177 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 HYIQ5T013 277 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 TMEM63BQ5T3F8 832 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 IFIT1BQ5T764 474 aaKnown RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 SFMBT2Q5VUG0 894 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 AP1ARQ63HQ0 302 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ZNF772Q68DY9 489 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 LDHAL6AQ6ZMR3 332 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 RGS9BPQ6ZS82 235 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 FAM43BQ6ZT52 329 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 CACNA2D4Q7Z3S7 1137 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 CATIPQ7Z7H3 387 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 TBC1D1Q86TI0 1168 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 CCDC84Q86UT8 332 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 CABP7Q86V35 215 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 HOOK3Q86VS8 718 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ECHDC2Q86YB7 292 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 JAMLQ86YT9 394 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 APLFQ8IW19 511 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ZNF34Q8IZ26 560 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 KIF2BQ8N4N8 673 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 FITM2Q8N6M3 262 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 MIGA1Q8NAN2 632 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 PROCA1Q8NCQ7 364 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 LNX1Q8TBB1 728 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 EPS8L3Q8TE67 593 aaKnown RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 SH3TC2Q8TF17 1288 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 CKAP2Q8WWK9 683 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 TBC1D5Q92609 795 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ALG3Q92685 438 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ESR2Q92731 530 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 GPKOWQ92917 476 aaPredicted RBP eCLIP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 SLC7A6OSQ96CW6 309 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 TBC1D31Q96DN5 1066 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 SAAL1Q96ER3 474 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 NAF1Q96HR8 494 aaKnown RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ZNF333Q96JL9 665 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 CEP63Q96MT8 703 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 FAM210AQ96ND0 272 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 CCDC85AQ96PX6 553 aaPredicted RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 NUDT12Q9BQG2 462 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 LSM14BQ9BX40 385 aaKnown RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 OSBPL1AQ9BXW6 950 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 ZMYND12Q9H0C1 365 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 RAB17Q9H0T7 212 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 NUCKS1Q9H1E3 243 aaKnown RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 LRMDAQ9H2I8 198 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms