RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 PPFIA3O75145 1194 aa15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 LINC00271P0C7V0 271 aa15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 ZSCAN20P17040 1043 aaPredicted RBP15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 EIF4BP23588 611 aaKnown RBP15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 DNM2P50570 870 aa15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 SCRN1Q12765 414 aa15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 CSPP1Q1MSJ5 1256 aa15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 MIER3Q7Z3K6 550 aa15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 NEK9Q8TD19 979 aa15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 LINC01599Q8WXQ3 324 aa15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 ADAM2Q99965 735 aa15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 JPH2Q9BR39 696 aaPredicted RBP15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 TMX1Q9H3N1 280 aa15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 UNC45AQ9H3U1 944 aa15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 CDHR5Q9HBB8 845 aa15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 PLAGL2Q9UPG8 496 aa15.32■□□□□ 0.04
TRBV4-1-201ENST00000390357 C9IYK1 514 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 HOXA2O43364 376 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 MMP1P03956 469 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 NLRP11P59045 1033 aaKnown RBP15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 UBE3AQ05086 875 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 TBC1D8BQ0IIM8 1120 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 COL19A1Q14993 1142 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 TARBP2Q15633 366 aaKnown RBP15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 KIZQ2M2Z5 673 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 B3GNT9Q6UX72 402 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 TRMT1LQ7Z2T5 733 aaKnown RBP15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 LINC01465Q8N7H1 131 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 RSPH1Q8WYR4 309 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 UIMC1Q96RL1 719 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 LARP6Q9BRS8 491 aaKnown RBP15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 C1QTNF1Q9BXJ1 281 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 INO80BQ9C086 356 aaPredicted RBP15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 TMEM161AQ9NX61 479 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 DDX25Q9UHL0 483 aaKnown RBP15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 TPCN1Q9ULQ1 816 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 AKT3Q9Y243 479 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 PPME1Q9Y570 386 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 PCDHB12Q9Y5F1 795 aa15.31■□□□□ 0.04
TRBV4-1-201ENST00000390357 ZNF862O60290 1169 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 BAG4O95429 457 aaKnown RBP15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 VTNP04004 478 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 PSMC5P62195 406 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 PRKCEQ02156 737 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 NPY5RQ15761 445 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 TMEM266Q2M3C6 531 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 TCEAL5Q5H9L2 206 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 NEK8Q86SG6 692 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 ETNPPLQ8TBG4 499 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 TMEM40Q8WWA1 233 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 OSMRQ99650 979 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 ATP6V0A4Q9HBG4 840 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 BRMS1Q9HCU9 246 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 CHST12Q9NRB3 414 aa15.3■□□□□ 0.04
TRBV4-1-201ENST00000390357 FSD2A1L4K1 749 aa15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 CARNS1A5YM72 827 aa15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 GRM6O15303 877 aa15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 CHMP2AO43633 222 aa15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 TDP2O95551 362 aa15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 EOMESO95936 686 aa15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 KCNA5P22460 613 aa15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 PPP2R5CQ13362 524 aa15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 INF2Q27J81 1249 aa15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 LETM2Q2VYF4 491 aa15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 PDE12Q6L8Q7 609 aaKnown RBP15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 FAM228AQ86W67 206 aa15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 ADAMTS10Q9H324 1103 aa15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 DACT1Q9NYF0 836 aa15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 ORC3Q9UBD5 711 aaPredicted RBP15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 MRPL42Q9Y6G3 142 aaKnown RBP15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 FNDC1Q4ZHG4 1894 aaPredicted RBP15.29■□□□□ 0.04
TRBV4-1-201ENST00000390357 IGKV6-21A0A0C4DH24 114 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 GRXCR2A6NFK2 248 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 MARCH6O60337 910 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 P4HBP07237 508 aaKnown RBP15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 SKIP12755 728 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 QARSP47897 775 aaKnown RBP15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 GPC3P51654 580 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 CLCN3P51790 818 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 AK2P54819 239 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 DSC3Q14574 896 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 CTC1Q2NKJ3 1217 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 PTCRAQ6ISU1 281 aaPredicted RBP15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 SLFN12Q8IYM2 578 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 SPPL3Q8TCT6 385 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 GCOM2Q9BZD3 368 aaPredicted RBP15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 PRKAG3Q9UGI9 489 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 KCNJ14Q9UNX9 436 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 REV3LO60673 3130 aa15.28■□□□□ 0.04
TRBV4-1-201ENST00000390357 NCOR1O75376 2440 aa15.27■□□□□ 0.04
TRBV4-1-201ENST00000390357 DDX11L8A8MPP1 907 aa15.27■□□□□ 0.04
TRBV4-1-201ENST00000390357 MGEA5O60502 916 aa15.27■□□□□ 0.04
TRBV4-1-201ENST00000390357 CCNT1O60563 726 aaKnown RBP15.27■□□□□ 0.04
TRBV4-1-201ENST00000390357 MAFO75444 373 aaPredicted RBP15.27■□□□□ 0.04
TRBV4-1-201ENST00000390357 DARSP14868 501 aaKnown RBP15.27■□□□□ 0.04
TRBV4-1-201ENST00000390357 SPOUT1Q5T280 376 aaKnown RBP15.27■□□□□ 0.04
TRBV4-1-201ENST00000390357 OTUD6AQ7L8S5 288 aa15.27■□□□□ 0.04
TRBV4-1-201ENST00000390357 ZNF410Q86VK4 478 aa15.27■□□□□ 0.04
TRBV4-1-201ENST00000390357 FAM178BQ8IXR5 827 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms