RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 GINM1Q9NU53 330 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 KDM6AO15550 1401 aaPredicted RBP14□□□□□ -0.17
PTPRN2-203ENST00000389418 PADI6Q6TGC4 694 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 USP49Q70CQ1 688 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 MB21D1Q8N884 522 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 CCDC68Q9H2F9 335 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 H7C0C1 242 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 MFAP3LO75121 409 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 SAT1P21673 171 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 SSTR3P32745 418 aaPredicted RBP14□□□□□ -0.17
PTPRN2-203ENST00000389418 ARL4AP40617 200 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 ARHGAP25P42331 645 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 ATP5OP48047 213 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 GCLMP48507 274 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 HDLBPQ00341 1268 aaKnown RBP14□□□□□ -0.17
PTPRN2-203ENST00000389418 ANKRD20A3Q5VUR7 823 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 TWF2Q6IBS0 349 aaKnown RBP14□□□□□ -0.17
PTPRN2-203ENST00000389418 VSIG1Q86XK7 387 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 RHOT2Q8IXI1 618 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 GTF3C2Q8WUA4 911 aaPredicted RBP14□□□□□ -0.17
PTPRN2-203ENST00000389418 PTPN22Q9Y2R2 807 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 SCINQ9Y6U3 715 aa14□□□□□ -0.17
PTPRN2-203ENST00000389418 GRIN3BO60391 1043 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 FTCDO95954 541 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 TROVE2P10155 538 aaKnown RBP eCLIP13.99□□□□□ -0.171e-7■■□□□ 11.8
PTPRN2-203ENST00000389418 FCER1AP12319 257 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 RPS12P25398 132 aaKnown RBP13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 BIRC2Q13490 618 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 ACER1Q8TDN7 264 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 SAAL1Q96ER3 474 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 MYOZ2Q9NPC6 264 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 PFDN4Q9NQP4 134 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 BCAP29Q9UHQ4 241 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 ARHGEF28Q8N1W1 1705 aaKnown RBP13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 GOLGA8KD6RF30 607 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 TAL1P17542 331 aaPredicted RBP13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 PSMC5P62195 406 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 TMEM62Q0P6H9 643 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 NBPF9Q3BBW0 867 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 RAD54LQ92698 747 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 TIPINQ9BVW5 301 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 MED4Q9NPJ6 270 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 SPDYE16A6NNV3 312 aaPredicted RBP13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 PGRMC1O00264 195 aaKnown RBP13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 WDR46O15213 610 aaKnown RBP13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 CLDN3O15551 220 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 KRT10P13645 584 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 RASA1P20936 1047 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 GARSP41250 739 aaKnown RBP13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 ECE1P42892 770 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 RASSF2P50749 326 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 SPDYE2Q495Y8 402 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 FBXO33Q7Z6M2 555 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 MAGOHBQ96A72 148 aaKnown RBP13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 STX2P32856 288 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 ATP1A2P50993 1020 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 PDIA5Q14554 519 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 ZNF667Q5HYK9 610 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 SDCCAG8Q86SQ7 713 aaPredicted RBP13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 MGARPQ8TDB4 240 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 MAP3K14Q99558 947 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 BPIFA3Q9BQP9 254 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 KCNQ5Q9NR82 932 aa13.99□□□□□ -0.17
PTPRN2-203ENST00000389418 MOCS3O95396 460 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 CTSHP09668 335 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 SMARCA1P28370 1054 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 KYAT1Q16773 422 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 BZW1Q7L1Q6 419 aaKnown RBP13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 DDNO94850 711 aaPredicted RBP13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 ANTXR2P58335 489 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 SIX6OS1Q8N1H7 587 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 KCTD17Q8N5Z5 321 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 ANKRD42Q8N9B4 389 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 PPP4R1Q8TF05 950 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 HACL1Q9UJ83 578 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 BUB1BO60566 1050 aaPredicted RBP13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 SEC31AO94979 1220 aaKnown RBP13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 SNX1Q13596 522 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 CDO1Q16878 200 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 CCDC144BQ3MJ40 725 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 PASD1Q8IV76 773 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 AGBL1Q96MI9 1066 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 SPATA33Q96N06 139 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 FAM213AQ9BRX8 229 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 AFG3L2Q9Y4W6 797 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 RGL2O15211 777 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 ADCY1Q08828 1119 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 COG2Q14746 738 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 EPHA7Q15375 998 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 FAM151AQ8WW52 585 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 AKT1S1Q96B36 256 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 ZBED2Q9BTP6 218 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 DDX23Q9BUQ8 820 aaKnown RBP13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 SLITRK6Q9H5Y7 841 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 SLC38A10Q9HBR0 1119 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 PDE11AQ9HCR9 933 aa13.98□□□□□ -0.17
PTPRN2-203ENST00000389418 NPHP3-ACAD11A0A0J9YXS1 232 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 ZBBXA8MT70 800 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 KIAA0391O15091 583 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms