RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 KCNT2Q6UVM3 1135 aa24.36■■□□□ 1.49
CNEP1R1-201ENST00000389134 TMEM105Q8N8V8 129 aa24.36■■□□□ 1.49
CNEP1R1-201ENST00000389134 CYP2W1Q8TAV3 490 aa24.36■■□□□ 1.49
CNEP1R1-201ENST00000389134 C2CD4DB7Z1M9 353 aa24.35■■□□□ 1.49
CNEP1R1-201ENST00000389134 ZNF484Q5JVG2 852 aa24.35■■□□□ 1.49
CNEP1R1-201ENST00000389134 FAM160B1Q5W0V3 765 aa24.35■■□□□ 1.49
CNEP1R1-201ENST00000389134 ASTLQ6HA08 431 aaPredicted RBP24.35■■□□□ 1.49
CNEP1R1-201ENST00000389134 CMTR1Q8N1G2 835 aaKnown RBP24.35■■□□□ 1.49
CNEP1R1-201ENST00000389134 ZNF558Q96NG5 402 aa24.35■■□□□ 1.49
CNEP1R1-201ENST00000389134 POMKQ9H5K3 350 aa24.35■■□□□ 1.49
CNEP1R1-201ENST00000389134 ZNF292O60281 2723 aa24.35■■□□□ 1.49
CNEP1R1-201ENST00000389134 CACNA1AO00555 2505 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 CALM1P0DP23 149 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 CALM2P0DP24 149 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 CALM3P0DP25 149 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 ARP10275 920 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 MTHFRP42898 656 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 ITGB3BPQ13352 177 aaPredicted RBP24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 CEP55Q53EZ4 464 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 NFXL1Q6ZNB6 911 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 LRRC55Q6ZSA7 311 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 ERMP1Q7Z2K6 904 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 FAM228AQ86W67 206 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 TEX2Q8IWB9 1127 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 CASD1Q96PB1 797 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 AGO4Q9HCK5 861 aaKnown RBP24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 SPG21Q9NZD8 308 aa24.34■■□□□ 1.49
CNEP1R1-201ENST00000389134 CCDC69A6NI79 296 aa24.33■■□□□ 1.49
CNEP1R1-201ENST00000389134 BACH1O14867 736 aa24.33■■□□□ 1.49
CNEP1R1-201ENST00000389134 DSC3Q14574 896 aa24.33■■□□□ 1.49
CNEP1R1-201ENST00000389134 SMC1AQ14683 1233 aaKnown RBP24.33■■□□□ 1.49
CNEP1R1-201ENST00000389134 KIZQ2M2Z5 673 aa24.33■■□□□ 1.49
CNEP1R1-201ENST00000389134 ABI1Q8IZP0 508 aa24.33■■□□□ 1.49
CNEP1R1-201ENST00000389134 LRRC43Q8N309 656 aa24.33■■□□□ 1.49
CNEP1R1-201ENST00000389134 MRPL43Q8N983 215 aaKnown RBP24.33■■□□□ 1.49
CNEP1R1-201ENST00000389134 OSMRQ99650 979 aa24.33■■□□□ 1.49
CNEP1R1-201ENST00000389134 HCFC2Q9Y5Z7 792 aa24.33■■□□□ 1.49
CNEP1R1-201ENST00000389134 hCG_1642624A0A1W2PR95 340 aa24.32■■□□□ 1.48
CNEP1R1-201ENST00000389134 FOSP01100 380 aaPredicted RBP24.32■■□□□ 1.48
CNEP1R1-201ENST00000389134 CLCN5P51795 746 aa24.32■■□□□ 1.48
CNEP1R1-201ENST00000389134 MCTP2Q6DN12 878 aa24.32■■□□□ 1.48
CNEP1R1-201ENST00000389134 ABHD15Q6UXT9 468 aa24.32■■□□□ 1.48
CNEP1R1-201ENST00000389134 HEATR3Q7Z4Q2 680 aa24.32■■□□□ 1.48
CNEP1R1-201ENST00000389134 NKD2Q969F2 451 aaPredicted RBP24.32■■□□□ 1.48
CNEP1R1-201ENST00000389134 MFSD1Q9H3U5 465 aa24.32■■□□□ 1.48
CNEP1R1-201ENST00000389134 CDH22Q9UJ99 828 aa24.32■■□□□ 1.48
CNEP1R1-201ENST00000389134 C2orf71A6NGG8 1288 aa24.31■■□□□ 1.48
CNEP1R1-201ENST00000389134 MEIS1O00470 390 aa24.31■■□□□ 1.48
CNEP1R1-201ENST00000389134 CHMLP26374 656 aa24.31■■□□□ 1.48
CNEP1R1-201ENST00000389134 BMS1Q14692 1282 aaKnown RBP24.31■■□□□ 1.48
CNEP1R1-201ENST00000389134 PDXDC2PQ6P474 469 aa24.31■■□□□ 1.48
CNEP1R1-201ENST00000389134 ZDHHC14Q8IZN3 488 aa24.31■■□□□ 1.48
CNEP1R1-201ENST00000389134 PLCD3Q8N3E9 789 aa24.31■■□□□ 1.48
CNEP1R1-201ENST00000389134 TMEM87BQ96K49 555 aa24.31■■□□□ 1.48
CNEP1R1-201ENST00000389134 ZNF302Q9NR11 478 aa24.31■■□□□ 1.48
CNEP1R1-201ENST00000389134 ZBTB42B2RXF5 422 aa24.3■■□□□ 1.48
CNEP1R1-201ENST00000389134 PRC1O43663 620 aa24.3■■□□□ 1.48
CNEP1R1-201ENST00000389134 GPR32O75388 356 aa24.3■■□□□ 1.48
CNEP1R1-201ENST00000389134 CCNE2O96020 404 aa24.3■■□□□ 1.48
CNEP1R1-201ENST00000389134 RXRAP19793 462 aa24.3■■□□□ 1.48
CNEP1R1-201ENST00000389134 MCM5P33992 734 aa24.3■■□□□ 1.48
CNEP1R1-201ENST00000389134 TTC22Q5TAA0 569 aa24.3■■□□□ 1.48
CNEP1R1-201ENST00000389134 CCDC82Q8N4S0 544 aa24.3■■□□□ 1.48
CNEP1R1-201ENST00000389134 TDRD5Q8NAT2 981 aaKnown RBP24.3■■□□□ 1.48
CNEP1R1-201ENST00000389134 MAP4K1Q92918 833 aa24.3■■□□□ 1.48
CNEP1R1-201ENST00000389134 PPP1R16BQ96T49 567 aa24.3■■□□□ 1.48
CNEP1R1-201ENST00000389134 RNF19AQ9NV58 838 aa24.3■■□□□ 1.48
CNEP1R1-201ENST00000389134 SH2B2O14492 632 aaPredicted RBP24.29■■□□□ 1.48
CNEP1R1-201ENST00000389134 CLASP2O75122 1294 aaKnown RBP24.29■■□□□ 1.48
CNEP1R1-201ENST00000389134 GSPT1P15170 499 aaKnown RBP24.29■■□□□ 1.48
CNEP1R1-201ENST00000389134 ZSCAN20P17040 1043 aaPredicted RBP24.29■■□□□ 1.48
CNEP1R1-201ENST00000389134 PBX3P40426 434 aa24.29■■□□□ 1.48
CNEP1R1-201ENST00000389134 LIFRP42702 1097 aa24.29■■□□□ 1.48
CNEP1R1-201ENST00000389134 MIS18BP1Q6P0N0 1132 aa24.29■■□□□ 1.48
CNEP1R1-201ENST00000389134 FRMD5Q7Z6J6 570 aa24.29■■□□□ 1.48
CNEP1R1-201ENST00000389134 CCDC60Q8IWA6 550 aaPredicted RBP24.29■■□□□ 1.48
CNEP1R1-201ENST00000389134 SMOC2Q9H3U7 446 aa24.29■■□□□ 1.48
CNEP1R1-201ENST00000389134 RIC8AQ9NPQ8 531 aa24.29■■□□□ 1.48
CNEP1R1-201ENST00000389134 USTQ9Y2C2 406 aa24.29■■□□□ 1.48
CNEP1R1-201ENST00000389134 DENND4AQ7Z401 1863 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 DDX39AO00148 427 aaKnown RBP24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 C22orf31O95567 290 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 VTNP04004 478 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 ASGR2P07307 311 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 ID4P47928 161 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 ATAT1Q5SQI0 421 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 KIAA1841Q6NSI8 718 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 TMTC3Q6ZXV5 915 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 NIPA1Q7RTP0 329 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 ECHDC2Q86YB7 292 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 SLC39A11Q8N1S5 342 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 ZNF710Q8N1W2 664 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 METTL13Q8N6R0 699 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 FANCBQ8NB91 859 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 BBXQ8WY36 941 aaPredicted RBP24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 ANO3Q9BYT9 981 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 DZANK1Q9NVP4 752 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 LIMD1Q9UGP4 676 aa24.28■■□□□ 1.48
CNEP1R1-201ENST00000389134 SGSM2O43147 1006 aa24.27■■□□□ 1.48
CNEP1R1-201ENST00000389134 ATP4AP20648 1035 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms