RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 DAGLAQ9Y4D2 1042 aa18.46■□□□□ 0.55
SGCB-201ENST00000381431 A6NJR5 290 aa18.46■□□□□ 0.55
SGCB-201ENST00000381431 ST3GAL1Q11201 340 aa18.46■□□□□ 0.55
SGCB-201ENST00000381431 ITPK1Q13572 414 aa18.46■□□□□ 0.55
SGCB-201ENST00000381431 NXNQ6DKJ4 435 aa18.46■□□□□ 0.55
SGCB-201ENST00000381431 TMED8Q6PL24 325 aaPredicted RBP18.46■□□□□ 0.55
SGCB-201ENST00000381431 SAAL1Q96ER3 474 aa18.46■□□□□ 0.55
SGCB-201ENST00000381431 SNX12Q9UMY4 172 aa18.46■□□□□ 0.55
SGCB-201ENST00000381431 ADGRB1O14514 1584 aa18.46■□□□□ 0.55
SGCB-201ENST00000381431 RHOBTB3O94955 611 aa18.46■□□□□ 0.55
SGCB-201ENST00000381431 ZRANB2O95218 330 aaKnown RBP eCLIP18.46■□□□□ 0.55
SGCB-201ENST00000381431 SRGNP10124 158 aa18.46■□□□□ 0.55
SGCB-201ENST00000381431 MAGOHP61326 146 aaKnown RBP18.46■□□□□ 0.55
SGCB-201ENST00000381431 Q3C1V9 767 aa18.46■□□□□ 0.55
SGCB-201ENST00000381431 NOA1Q8NC60 698 aaKnown RBP18.46■□□□□ 0.55
SGCB-201ENST00000381431 RAB3IPQ96QF0 476 aaPredicted RBP18.46■□□□□ 0.55
SGCB-201ENST00000381431 C11orf70Q9BRQ4 267 aa18.46■□□□□ 0.55
SGCB-201ENST00000381431 ABL1P00519 1130 aa18.46■□□□□ 0.54
SGCB-201ENST00000381431 EIF3BP55884 814 aaKnown RBP18.46■□□□□ 0.54
SGCB-201ENST00000381431 RPUSD2Q8IZ73 545 aaKnown RBP18.46■□□□□ 0.54
SGCB-201ENST00000381431 ANKRD7Q92527 254 aa18.46■□□□□ 0.54
SGCB-201ENST00000381431 EIF2AK1Q9BQI3 630 aaKnown RBP18.46■□□□□ 0.54
SGCB-201ENST00000381431 GMNNO75496 209 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 PSAPP07602 524 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 GPC5P78333 572 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 NYAP1Q6ZVC0 841 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 CCNYQ8ND76 341 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 FAM213AQ9BRX8 229 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 ECE2O60344 883 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 NTSR2O95665 410 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 RASA1P20936 1047 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 CCND2P30279 289 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 KLK7P49862 253 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 TFDP1Q14186 410 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 OR6B2Q6IFH4 312 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 TTLL6Q8N841 843 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 DCPSQ96C86 337 aaKnown RBP18.45■□□□□ 0.54
SGCB-201ENST00000381431 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.45■□□□□ 0.54
SGCB-201ENST00000381431 CNTNAP5Q8WYK1 1306 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 DENND3A2RUS2 1198 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 ACTN1P12814 892 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 MSH2P43246 934 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 SBK1Q52WX2 424 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 RINT1Q6NUQ1 792 aa18.45■□□□□ 0.54
SGCB-201ENST00000381431 GABPB2Q8TAK5 448 aaPredicted RBP18.45■□□□□ 0.54
SGCB-201ENST00000381431 ZNF668Q96K58 619 aaPredicted RBP18.45■□□□□ 0.54
SGCB-201ENST00000381431 CNOT10Q9H9A5 744 aaKnown RBP18.45■□□□□ 0.54
SGCB-201ENST00000381431 TTC7AQ9ULT0 858 aaPredicted RBP18.45■□□□□ 0.54
SGCB-201ENST00000381431 MCF2LO15068 1137 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 KLRK1P26718 216 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 SLC8A1P32418 973 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 ZNF543Q08ER8 600 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 CIAPIN1Q6FI81 312 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 LXNQ9BS40 222 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 FLT1P17948 1338 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 CAMSAP1Q5T5Y3 1602 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 GABPAQ06546 454 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 SPP2Q13103 211 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 NGRNQ9NPE2 291 aaKnown RBP18.44■□□□□ 0.54
SGCB-201ENST00000381431 MIF4GDA9UHW6 222 aaKnown RBP18.44■□□□□ 0.54
SGCB-201ENST00000381431 PDIA5Q14554 519 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 FAM47EQ6ZV65 393 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 CCDC117Q8IWD4 279 aaPredicted RBP18.44■□□□□ 0.54
SGCB-201ENST00000381431 NSMCE1Q8WV22 266 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 RNF25Q96BH1 459 aaPredicted RBP18.44■□□□□ 0.54
SGCB-201ENST00000381431 ZWILCHQ9H900 591 aa18.44■□□□□ 0.54
SGCB-201ENST00000381431 VAMP7P51809 220 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 PPP1R18Q6NYC8 613 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 DARS2Q6PI48 645 aaKnown RBP18.43■□□□□ 0.54
SGCB-201ENST00000381431 TBC1D1Q86TI0 1168 aaPredicted RBP18.43■□□□□ 0.54
SGCB-201ENST00000381431 TBC1D16Q8TBP0 767 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 JPH2Q9BR39 696 aaPredicted RBP18.43■□□□□ 0.54
SGCB-201ENST00000381431 AFG3L2Q9Y4W6 797 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 MMEP08473 750 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 USP11P51784 963 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 ALCAMQ13740 583 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 CDO1Q16878 200 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 C6orf118Q5T5N4 469 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 TMEM270Q6UE05 265 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 SH2D3CQ8N5H7 860 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 KCTD6Q8NC69 237 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 SMYD2Q9NRG4 433 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 NUB1Q9Y5A7 615 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 REREQ9P2R6 1566 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 CTIFO43310 598 aaKnown RBP18.43■□□□□ 0.54
SGCB-201ENST00000381431 MT-ND3P03897 115 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 ORC2Q13416 577 aaPredicted RBP18.43■□□□□ 0.54
SGCB-201ENST00000381431 PHLDB3Q6NSJ2 640 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 SCYL1Q96KG9 808 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 WDR64B1ANS9 1081 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 PODXLO00592 558 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 TLR3O15455 904 aaKnown RBP18.43■□□□□ 0.54
SGCB-201ENST00000381431 QARSP47897 775 aaKnown RBP18.43■□□□□ 0.54
SGCB-201ENST00000381431 HP1BP3Q5SSJ5 553 aaPredicted RBP18.43■□□□□ 0.54
SGCB-201ENST00000381431 ZNF449Q6P9G9 518 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 DPP9Q86TI2 863 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 ERICH1Q86X53 443 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 GIMAP8Q8ND71 665 aaPredicted RBP18.43■□□□□ 0.54
SGCB-201ENST00000381431 CFAP57Q96MR6 1250 aa18.43■□□□□ 0.54
SGCB-201ENST00000381431 ATF5Q9Y2D1 282 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms