RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 MPHOSPH10O00566 681 aaKnown RBP15.04■□□□□ -0
SDC1-202ENST00000381150 EVI5O60447 810 aa15.04■□□□□ -0
SDC1-202ENST00000381150 TLR2O60603 784 aa15.04■□□□□ -0
SDC1-202ENST00000381150 SERPING1P05155 500 aa15.04■□□□□ -0
SDC1-202ENST00000381150 PDHA1P08559 390 aa15.04■□□□□ -0
SDC1-202ENST00000381150 IFI35P80217 286 aaPredicted RBP15.04■□□□□ -0
SDC1-202ENST00000381150 NAB2Q15742 525 aa15.04■□□□□ -0
SDC1-202ENST00000381150 THEMIS2Q5TEJ8 643 aa15.04■□□□□ -0
SDC1-202ENST00000381150 APOBEC3HQ6NTF7 200 aaKnown RBP15.04■□□□□ -0
SDC1-202ENST00000381150 SLC17A8Q8NDX2 589 aa15.04■□□□□ -0
SDC1-202ENST00000381150 CCT6BQ92526 530 aa15.04■□□□□ -0
SDC1-202ENST00000381150 SAAL1Q96ER3 474 aa15.04■□□□□ -0
SDC1-202ENST00000381150 INPP4AQ96PE3 977 aaPredicted RBP15.04■□□□□ -0
SDC1-202ENST00000381150 FMO2Q99518 471 aa15.04■□□□□ -0
SDC1-202ENST00000381150 MTFR1LQ9H019 292 aa15.04■□□□□ -0
SDC1-202ENST00000381150 CUEDC2Q9H467 287 aa15.04■□□□□ -0
SDC1-202ENST00000381150 DNAJC17Q9NVM6 304 aaKnown RBP15.04■□□□□ -0
SDC1-202ENST00000381150 SEC63Q9UGP8 760 aaKnown RBP15.04■□□□□ -0
SDC1-202ENST00000381150 MRPL12P52815 198 aaKnown RBP15.04■□□□□ -0
SDC1-202ENST00000381150 MEI1Q5TIA1 1274 aa15.04■□□□□ -0
SDC1-202ENST00000381150 COL23A1Q86Y22 540 aaPredicted RBP15.04■□□□□ -0
SDC1-202ENST00000381150 METTL13Q8N6R0 699 aa15.04■□□□□ -0
SDC1-202ENST00000381150 CCDC26Q8TAB7 109 aa15.04■□□□□ -0
SDC1-202ENST00000381150 GDAP1Q8TB36 358 aa15.04■□□□□ -0
SDC1-202ENST00000381150 COA7Q96BR5 231 aa15.04■□□□□ -0
SDC1-202ENST00000381150 DBR1Q9UK59 544 aaKnown RBP15.04■□□□□ -0
SDC1-202ENST00000381150 TRIM33Q9UPN9 1127 aa15.04■□□□□ -0
SDC1-202ENST00000381150 hCG_1984214I3L0E3 225 aa15.03■□□□□ -0
SDC1-202ENST00000381150 UBOX5O94941 541 aa15.03■□□□□ -0
SDC1-202ENST00000381150 DRD4P21917 467 aa15.03■□□□□ -0
SDC1-202ENST00000381150 ASPRV1Q53RT3 343 aa15.03■□□□□ -0
SDC1-202ENST00000381150 CDC42EP5Q6NZY7 148 aa15.03■□□□□ -0
SDC1-202ENST00000381150 DPP8Q6V1X1 898 aaPredicted RBP15.03■□□□□ -0
SDC1-202ENST00000381150 LRRC47Q8N1G4 583 aaKnown RBP15.03■□□□□ -0
SDC1-202ENST00000381150 ZNF713Q8N859 430 aaPredicted RBP15.03■□□□□ -0
SDC1-202ENST00000381150 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
SDC1-202ENST00000381150 SNX29Q8TEQ0 813 aa15.03■□□□□ -0
SDC1-202ENST00000381150 AKT1S1Q96B36 256 aa15.03■□□□□ -0
SDC1-202ENST00000381150 ZC3H12CQ9C0D7 883 aaKnown RBP15.03■□□□□ -0
SDC1-202ENST00000381150 USP40Q9NVE5 1235 aa15.03■□□□□ -0
SDC1-202ENST00000381150 SERPINB13Q9UIV8 391 aa15.03■□□□□ -0
SDC1-202ENST00000381150 MYO3BQ8WXR4 1341 aa15.03■□□□□ -0
SDC1-202ENST00000381150 ATXN2Q99700 1313 aaKnown RBP15.03■□□□□ -0
SDC1-202ENST00000381150 PPP1R11O60927 126 aaPredicted RBP15.03■□□□□ -0
SDC1-202ENST00000381150 NPR1P16066 1061 aa15.03■□□□□ -0
SDC1-202ENST00000381150 ORC2Q13416 577 aaPredicted RBP15.03■□□□□ -0
SDC1-202ENST00000381150 DOK7Q18PE1 504 aa15.03■□□□□ -0
SDC1-202ENST00000381150 DENND2CQ68D51 928 aa15.03■□□□□ -0
SDC1-202ENST00000381150 HHIPL2Q6UWX4 724 aa15.03■□□□□ -0
SDC1-202ENST00000381150 REXO1Q8N1G1 1221 aaKnown RBP15.03■□□□□ -0
SDC1-202ENST00000381150 RUBCNQ92622 972 aa15.03■□□□□ -0
SDC1-202ENST00000381150 C7orf25Q9BPX7 421 aa15.03■□□□□ -0
SDC1-202ENST00000381150 JMJD4Q9H9V9 463 aa15.03■□□□□ -0
SDC1-202ENST00000381150 MAGEF1Q9HAY2 307 aa15.03■□□□□ -0
SDC1-202ENST00000381150 TRPC6Q9Y210 931 aa15.03■□□□□ -0
SDC1-202ENST00000381150 SIPA1L1O43166 1804 aa15.03■□□□□ -0
SDC1-202ENST00000381150 ZNF646O15015 1829 aaPredicted RBP15.02■□□□□ -0
SDC1-202ENST00000381150 IGF2BP3O00425 579 aaKnown RBP eCLIP15.02■□□□□ -02e-7■■■□□ 14.9
SDC1-202ENST00000381150 SLURP2P0DP57 97 aa15.02■□□□□ -0
SDC1-202ENST00000381150 BRD2P25440 801 aaKnown RBP15.02■□□□□ -0
SDC1-202ENST00000381150 CDK17Q00537 523 aa15.02■□□□□ -0
SDC1-202ENST00000381150 KCNMA1Q12791 1236 aa15.02■□□□□ -0
SDC1-202ENST00000381150 SNX1Q13596 522 aa15.02■□□□□ -0
SDC1-202ENST00000381150 MTMR3Q13615 1198 aa15.02■□□□□ -0
SDC1-202ENST00000381150 CUL1Q13616 776 aa15.02■□□□□ -0
SDC1-202ENST00000381150 BYSLQ13895 437 aaKnown RBP15.02■□□□□ -0
SDC1-202ENST00000381150 HGSNATQ68CP4 663 aa15.02■□□□□ -0
SDC1-202ENST00000381150 CD302Q8IX05 232 aa15.02■□□□□ -0
SDC1-202ENST00000381150 U2AF1L4Q8WU68 220 aaKnown RBP15.02■□□□□ -0
SDC1-202ENST00000381150 NOP53Q9NZM5 478 aaKnown RBP15.02■□□□□ -0
SDC1-202ENST00000381150 MYH4Q9Y623 1939 aa15.02■□□□□ -0
SDC1-202ENST00000381150 FOXO6A8MYZ6 492 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 H0Y3Z8 333 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 SCNN1DP51172 638 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 EIF6P56537 245 aaKnown RBP15.02□□□□□ -0.01
SDC1-202ENST00000381150 ZNF543Q08ER8 600 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 XRCC4Q13426 336 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 SLC18A3Q16572 532 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 BZW1Q7L1Q6 419 aaKnown RBP15.02□□□□□ -0.01
SDC1-202ENST00000381150 TRPM8Q7Z2W7 1104 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 NLGN1Q8N2Q7 840 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 DDX12PQ92771 950 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 ECT2Q9H8V3 914 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 CPSF2Q9P2I0 782 aaKnown RBP15.02□□□□□ -0.01
SDC1-202ENST00000381150 PTPN22Q9Y2R2 807 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 TTLL1O95922 423 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 FGFR4P22455 802 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 TNFRSF8P28908 595 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 PCK1P35558 622 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 PTK2Q05397 1052 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 KCNQ5Q9NR82 932 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 C15orf41Q9Y2V0 281 aa15.02□□□□□ -0.01
SDC1-202ENST00000381150 CLK2P49760 499 aaKnown RBP15.01□□□□□ -0.01
SDC1-202ENST00000381150 FIGNQ5HY92 759 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 NUGGCQ68CJ6 796 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 ALKBH5Q6P6C2 394 aaKnown RBP15.01□□□□□ -0.01
SDC1-202ENST00000381150 ERICH1Q86X53 443 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 ZSCAN29Q8IWY8 852 aaPredicted RBP15.01□□□□□ -0.01
SDC1-202ENST00000381150 ZFPM1Q8IX07 1006 aa15.01□□□□□ -0.01
SDC1-202ENST00000381150 MREGQ8N565 214 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms