RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 MMRN2Q9H8L6 949 aa12.68□□□□□ -0.38
PITRM1-202ENST00000380989 SLC39A2Q9NP94 309 aa12.68□□□□□ -0.38
PITRM1-202ENST00000380989 GGT7Q9UJ14 662 aa12.68□□□□□ -0.38
PITRM1-202ENST00000380989 SNX12Q9UMY4 172 aa12.68□□□□□ -0.38
PITRM1-202ENST00000380989 SORBS3O60504 671 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 EIF4A3P38919 411 aaKnown RBP12.67□□□□□ -0.38
PITRM1-202ENST00000380989 KIF5AQ12840 1032 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 BAATQ14032 418 aaPredicted RBP12.67□□□□□ -0.38
PITRM1-202ENST00000380989 CCDC181Q5TID7 509 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 CRYGNQ8WXF5 182 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 CCDC42Q96M95 316 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 ASCC2Q9H1I8 757 aaPredicted RBP12.67□□□□□ -0.38
PITRM1-202ENST00000380989 GBA2Q9HCG7 927 aaPredicted RBP12.67□□□□□ -0.38
PITRM1-202ENST00000380989 ITIH6Q6UXX5 1313 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 LGALS16A8MUM7 142 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 HGSO14964 777 aaPredicted RBP12.67□□□□□ -0.38
PITRM1-202ENST00000380989 ZNF76P36508 570 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 MTIF2P46199 727 aaKnown RBP12.67□□□□□ -0.38
PITRM1-202ENST00000380989 GRM1Q13255 1194 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 SH3D19Q5HYK7 790 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 ZNF658Q5TYW1 1059 aaPredicted RBP12.67□□□□□ -0.38
PITRM1-202ENST00000380989 MAATS1Q7Z4T9 603 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 CCDC91Q7Z6B0 441 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 LENG9Q96B70 501 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 DUSP9Q99956 384 aaKnown RBP12.67□□□□□ -0.38
PITRM1-202ENST00000380989 FLT3P36888 993 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 FSTL1Q12841 308 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
PITRM1-202ENST00000380989 LRRC41Q15345 812 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 ECM1Q16610 540 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 Q3C1V9 767 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 BANK1Q8NDB2 785 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 TBC1D31Q96DN5 1066 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 KRT12Q99456 494 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 PACSIN1Q9BY11 444 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 CAPN11Q9UMQ6 739 aa12.67□□□□□ -0.38
PITRM1-202ENST00000380989 ITGBL1O95965 494 aaPredicted RBP12.66□□□□□ -0.38
PITRM1-202ENST00000380989 PAX7P23759 505 aa12.66□□□□□ -0.38
PITRM1-202ENST00000380989 C8orf74Q6P047 294 aa12.66□□□□□ -0.38
PITRM1-202ENST00000380989 KSR1Q8IVT5 923 aa12.66□□□□□ -0.38
PITRM1-202ENST00000380989 RBM46Q8TBY0 533 aaKnown RBP12.66□□□□□ -0.38
PITRM1-202ENST00000380989 CNOT6LQ96LI5 555 aaKnown RBP12.66□□□□□ -0.38
PITRM1-202ENST00000380989 MMTAG2Q9BU76 263 aaKnown RBP12.66□□□□□ -0.38
PITRM1-202ENST00000380989 HAUS2Q9NVX0 235 aa12.66□□□□□ -0.38
PITRM1-202ENST00000380989 DDX39AO00148 427 aaKnown RBP12.66□□□□□ -0.38
PITRM1-202ENST00000380989 HEXIM1O94992 359 aaKnown RBP12.66□□□□□ -0.38
PITRM1-202ENST00000380989 MYCLP12524 364 aaPredicted RBP12.66□□□□□ -0.38
PITRM1-202ENST00000380989 SREBF1P36956 1147 aa12.66□□□□□ -0.38
PITRM1-202ENST00000380989 RRAGAQ7L523 313 aa12.66□□□□□ -0.38
PITRM1-202ENST00000380989 CCDC13Q8IYE1 715 aa12.66□□□□□ -0.38
PITRM1-202ENST00000380989 SYTL5Q8TDW5 730 aaPredicted RBP12.66□□□□□ -0.38
PITRM1-202ENST00000380989 ZNF473Q8WTR7 871 aaKnown RBP12.66□□□□□ -0.38
PITRM1-202ENST00000380989 PIK3R5Q8WYR1 880 aa12.66□□□□□ -0.38
PITRM1-202ENST00000380989 N4BP2L2Q92802 583 aaPredicted RBP12.66□□□□□ -0.38
PITRM1-202ENST00000380989 CCDC51Q96ER9 411 aa12.66□□□□□ -0.38
PITRM1-202ENST00000380989 PIK3CDO00329 1044 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 DNM1LO00429 736 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 CHMP2AO43633 222 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 ARP10275 920 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 GSCP56915 257 aaPredicted RBP12.65□□□□□ -0.38
PITRM1-202ENST00000380989 GPAT2Q6NUI2 795 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 GBP6Q6ZN66 633 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 DYMQ7RTS9 669 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 TRMT1LQ7Z2T5 733 aaKnown RBP12.65□□□□□ -0.38
PITRM1-202ENST00000380989 FAM228AQ86W67 206 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 ADSSL1Q8N142 457 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 NOC4LQ9BVI4 516 aaKnown RBP12.65□□□□□ -0.38
PITRM1-202ENST00000380989 WDR11Q9BZH6 1224 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 STIM2Q9P246 746 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 HTTP42858 3142 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 BMP15O95972 392 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 MYBL1P10243 752 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 UBA7P41226 1012 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 CNTN2Q02246 1040 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 PPIL2Q13356 520 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 AP3B2Q13367 1082 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 CEP85LQ5SZL2 805 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 ARL6IP4Q66PJ3 421 aaKnown RBP12.65□□□□□ -0.38
PITRM1-202ENST00000380989 PPP4R3AQ6IN85 833 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 RNF207Q6ZRF8 634 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 CCT8L2Q96SF2 557 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 TLR10Q9BXR5 811 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 MYO1AQ9UBC5 1043 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 ADAMTS5Q9UNA0 930 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 PCDHA13Q9Y5I0 950 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 LRRC53A6NM62 1247 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 MSH4O15457 936 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 MEFVO15553 781 aaPredicted RBP12.65□□□□□ -0.38
PITRM1-202ENST00000380989 AKR1B10O60218 316 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 IPO7O95373 1038 aaKnown RBP12.65□□□□□ -0.38
PITRM1-202ENST00000380989 KIF11P52732 1056 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 MIIPQ5JXC2 388 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 WDR78Q5VTH9 848 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 MDM1Q8TC05 714 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 TTYH3Q9C0H2 523 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 BCAS3Q9H6U6 928 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 HOXC10Q9NYD6 342 aa12.65□□□□□ -0.38
PITRM1-202ENST00000380989 HSF2BPO75031 334 aa12.64□□□□□ -0.39
PITRM1-202ENST00000380989 KIAA0754O94854 1291 aa12.64□□□□□ -0.39
PITRM1-202ENST00000380989 CCDC172P0C7W6 258 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms