RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 K7ELQ4 463 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-202ENST00000380747 WNT7AO00755 349 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 TBX3O15119 743 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 HBP1O60381 514 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 NEMFO60524 1076 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 FGBP02675 491 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 MCM7P33993 719 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 RFC2P35250 354 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 CUL4AQ13619 759 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 ZNF174Q15697 407 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 TRIM71Q2Q1W2 868 aaKnown RBP10.39□□□□□ -0.75
HMGN1-202ENST00000380747 ZNF618Q5T7W0 954 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 LARP1BQ659C4 914 aaKnown RBP10.39□□□□□ -0.75
HMGN1-202ENST00000380747 NCAPH2Q6IBW4 605 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 RUFY4Q6ZNE9 571 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 ZNF365Q70YC5 407 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 NOSTRINQ8IVI9 506 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 RDM1Q8NG50 284 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 ATP8B4Q8TF62 1192 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 HAS1Q92839 578 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 ZBTB10Q96DT7 871 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 MTIF3Q9H2K0 278 aaKnown RBP10.39□□□□□ -0.75
HMGN1-202ENST00000380747 MSRAQ9UJ68 235 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 TUBE1Q9UJT0 475 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 VAV3Q9UKW4 847 aa10.39□□□□□ -0.75
HMGN1-202ENST00000380747 MAFBQ9Y5Q3 323 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-202ENST00000380747 IGSF9BQ9UPX0 1349 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 GRXCR1A8MXD5 290 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 RSPH10B2B2RC85 870 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 EML1O00423 815 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 CTSHP09668 335 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 RSPH10BP0C881 870 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 ATP4AP20648 1035 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 TXKP42681 527 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 ADAM17P78536 824 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 RBL2Q08999 1139 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 PPP2R5CQ13362 524 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 UGCGQ16739 394 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 ZNF484Q5JVG2 852 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 TTC38Q5R3I4 469 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 VARS2Q5ST30 1063 aaKnown RBP10.38□□□□□ -0.75
HMGN1-202ENST00000380747 MARCH8Q5T0T0 291 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 OTOP2Q7RTS6 562 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 HSCBQ8IWL3 235 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 SLFN12Q8IYM2 578 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 FAM167AQ96KS9 214 aa10.38□□□□□ -0.75
HMGN1-202ENST00000380747 FAM49AQ9H0Q0 323 aaPredicted RBP10.38□□□□□ -0.75
HMGN1-202ENST00000380747 VPS37CA5D8V6 355 aaPredicted RBP10.37□□□□□ -0.75
HMGN1-202ENST00000380747 ZBBXA8MT70 800 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 C3orf80F5H4A9 247 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 ZNF862O60290 1169 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 PFKMP08237 780 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 ACTN1P12814 892 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 BMP1P13497 986 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 U2AF2P26368 475 aaKnown RBP eCLIP10.37□□□□□ -0.758e-8■■■■■ 35
HMGN1-202ENST00000380747 KLRC1P26715 233 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 TRAPPC10P48553 1259 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 PRKCEQ02156 737 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 AAK1Q2M2I8 961 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 PROX2Q3B8N5 592 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 TAF2Q6P1X5 1199 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 TRAF7Q6Q0C0 670 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 MTHFD1LQ6UB35 978 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 B3GNT9Q6UX72 402 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 RSPH3Q86UC2 560 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 BANK1Q8NDB2 785 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 DNAJB3Q8WWF6 145 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 PPM1EQ8WY54 764 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 SNX21Q969T3 373 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 TMEM60Q9H2L4 133 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 SLC28A3Q9HAS3 691 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 NRBP2Q9NSY0 501 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 SEPT9Q9UHD8 586 aaPredicted RBP10.37□□□□□ -0.75
HMGN1-202ENST00000380747 PCDHA12Q9UN75 941 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 CEP131Q9UPN4 1083 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 PCDHA2Q9Y5H9 948 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 COL1A2P08123 1366 aa10.37□□□□□ -0.75
HMGN1-202ENST00000380747 MBLAC1A4D2B0 266 aaPredicted RBP10.36□□□□□ -0.75
HMGN1-202ENST00000380747 DDX11L8A8MPP1 907 aa10.36□□□□□ -0.75
HMGN1-202ENST00000380747 RBAK-RBAKDNI3L0D1 243 aa10.36□□□□□ -0.75
HMGN1-202ENST00000380747 NBNO60934 754 aa10.36□□□□□ -0.75
HMGN1-202ENST00000380747 CAND2O75155 1236 aa10.36□□□□□ -0.75
HMGN1-202ENST00000380747 PARNO95453 639 aaKnown RBP10.36□□□□□ -0.75
HMGN1-202ENST00000380747 POU3F3P20264 500 aaPredicted RBP10.36□□□□□ -0.75
HMGN1-202ENST00000380747 SSTR3P32745 418 aaPredicted RBP10.36□□□□□ -0.75
HMGN1-202ENST00000380747 PSMC5P62195 406 aa10.36□□□□□ -0.75
HMGN1-202ENST00000380747 ORC2Q13416 577 aaPredicted RBP10.36□□□□□ -0.75
HMGN1-202ENST00000380747 EPHA7Q15375 998 aa10.36□□□□□ -0.75
HMGN1-202ENST00000380747 NUDT18Q6ZVK8 323 aa10.36□□□□□ -0.75
HMGN1-202ENST00000380747 MARVELD3Q96A59 401 aa10.36□□□□□ -0.75
HMGN1-202ENST00000380747 MTMR9Q96QG7 549 aa10.36□□□□□ -0.75
HMGN1-202ENST00000380747 TTC12Q9H892 705 aaPredicted RBP10.36□□□□□ -0.75
HMGN1-202ENST00000380747 PLSCR2Q9NRY7 297 aa10.36□□□□□ -0.75
HMGN1-202ENST00000380747 TMEM150BA6NC51 233 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 ZBTB42B2RXF5 422 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 M0QZ92 97 aa10.35□□□□□ -0.75
HMGN1-202ENST00000380747 DKC1O60832 514 aaKnown RBP eCLIP10.35□□□□□ -0.75
HMGN1-202ENST00000380747 P4HBP07237 508 aaKnown RBP10.35□□□□□ -0.75
HMGN1-202ENST00000380747 HSP90AA1P07900 732 aaKnown RBP10.35□□□□□ -0.75
HMGN1-202ENST00000380747 OR52Z1P0C646 297 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms