RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ZC2HC1CQ53FD0 456 aaPredicted RBP21.35■■□□□ 1.01
SSU72-204ENST00000378726 RAD9BQ6WBX8 426 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 FIZ1Q96SL8 496 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 PARD6BQ9BYG5 372 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 UBXN6Q9BZV1 441 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 R3HDMLQ9H3Y0 253 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 NFASCO94856 1347 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 LOC285556D6RIA3 1793 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 TMEM150BA6NC51 233 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 RASSF10A6NK89 507 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 EIF3DO15371 548 aaKnown RBP eCLIP21.35■■□□□ 1.01
SSU72-204ENST00000378726 TRIM21P19474 475 aaKnown RBP21.35■■□□□ 1.01
SSU72-204ENST00000378726 MAPK7Q13164 816 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 DAW1Q8N136 415 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 CCDC43Q96MW1 224 aaKnown RBP21.35■■□□□ 1.01
SSU72-204ENST00000378726 JPH1Q9HDC5 661 aaPredicted RBP21.35■■□□□ 1.01
SSU72-204ENST00000378726 TYW1Q9NV66 732 aaKnown RBP21.35■■□□□ 1.01
SSU72-204ENST00000378726 SLC9A2Q9UBY0 812 aa21.35■■□□□ 1.01
SSU72-204ENST00000378726 SOWAHBA6NEL2 793 aa21.34■■□□□ 1.01
SSU72-204ENST00000378726 ATP8B1O43520 1251 aa21.34■■□□□ 1.01
SSU72-204ENST00000378726 SP2Q02086 613 aa21.34■■□□□ 1.01
SSU72-204ENST00000378726 RETREG2Q8NC44 543 aa21.34■■□□□ 1.01
SSU72-204ENST00000378726 LZTFL1Q9NQ48 299 aa21.34■■□□□ 1.01
SSU72-204ENST00000378726 GABBR1Q9UBS5 961 aa21.34■■□□□ 1.01
SSU72-204ENST00000378726 CCDC175P0C221 793 aa21.33■■□□□ 1.01
SSU72-204ENST00000378726 MARSP56192 900 aaKnown RBP21.33■■□□□ 1.01
SSU72-204ENST00000378726 SP4Q02446 784 aa21.33■■□□□ 1.01
SSU72-204ENST00000378726 XKR9Q5GH70 373 aa21.33■■□□□ 1.01
SSU72-204ENST00000378726 SEPT14Q6ZU15 432 aa21.33■■□□□ 1.01
SSU72-204ENST00000378726 OR8K1Q8NGG5 319 aa21.33■■□□□ 1.01
SSU72-204ENST00000378726 ANKEF1Q9NU02 776 aa21.33■■□□□ 1.01
SSU72-204ENST00000378726 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.33■■□□□ 1.01
SSU72-204ENST00000378726 TELO2Q9Y4R8 837 aa21.33■■□□□ 1.01
SSU72-204ENST00000378726 SORBS3O60504 671 aa21.33■■□□□ 1
SSU72-204ENST00000378726 USO1O60763 962 aaKnown RBP21.33■■□□□ 1
SSU72-204ENST00000378726 ICAM3P32942 547 aa21.33■■□□□ 1
SSU72-204ENST00000378726 SWSAP1Q6NVH7 229 aa21.33■■□□□ 1
SSU72-204ENST00000378726 RABGGTAQ92696 567 aa21.33■■□□□ 1
SSU72-204ENST00000378726 PCDHB13Q9Y5F0 798 aa21.33■■□□□ 1
SSU72-204ENST00000378726 ADGRG1Q9Y653 693 aa21.33■■□□□ 1
SSU72-204ENST00000378726 BACH1O14867 736 aa21.32■■□□□ 1
SSU72-204ENST00000378726 PSAPP07602 524 aa21.32■■□□□ 1
SSU72-204ENST00000378726 FECHP22830 423 aa21.32■■□□□ 1
SSU72-204ENST00000378726 NPEPPSP55786 919 aa21.32■■□□□ 1
SSU72-204ENST00000378726 STXBP4Q6ZWJ1 553 aa21.32■■□□□ 1
SSU72-204ENST00000378726 TMTC1Q8IUR5 882 aa21.32■■□□□ 1
SSU72-204ENST00000378726 KSR1Q8IVT5 923 aa21.32■■□□□ 1
SSU72-204ENST00000378726 FAM133AQ8N9E0 248 aa21.32■■□□□ 1
SSU72-204ENST00000378726 GOLGA1Q92805 767 aa21.32■■□□□ 1
SSU72-204ENST00000378726 TTYH3Q9C0H2 523 aa21.32■■□□□ 1
SSU72-204ENST00000378726 AGPAT5Q9NUQ2 364 aa21.32■■□□□ 1
SSU72-204ENST00000378726 LARSQ9P2J5 1176 aaKnown RBP21.32■■□□□ 1
SSU72-204ENST00000378726 UNCXA6NJT0 531 aa21.32■■□□□ 1
SSU72-204ENST00000378726 CLIC2O15247 247 aa21.32■■□□□ 1
SSU72-204ENST00000378726 TGFB1I1O43294 461 aa21.32■■□□□ 1
SSU72-204ENST00000378726 RPL13P26373 211 aaKnown RBP21.32■■□□□ 1
SSU72-204ENST00000378726 ACTR2P61160 394 aa21.32■■□□□ 1
SSU72-204ENST00000378726 ANO5Q75V66 913 aa21.32■■□□□ 1
SSU72-204ENST00000378726 TRIM59Q8IWR1 403 aa21.32■■□□□ 1
SSU72-204ENST00000378726 RRAGCQ9HB90 399 aa21.32■■□□□ 1
SSU72-204ENST00000378726 ZCCHC17Q9NP64 241 aaKnown RBP21.32■■□□□ 1
SSU72-204ENST00000378726 A0A0G2JMZ2 1700 aa21.31■■□□□ 1
SSU72-204ENST00000378726 NR3C1P04150 777 aa21.31■■□□□ 1
SSU72-204ENST00000378726 TSR1Q2NL82 804 aaKnown RBP21.31■■□□□ 1
SSU72-204ENST00000378726 FIGNQ5HY92 759 aa21.31■■□□□ 1
SSU72-204ENST00000378726 PLA2G4FQ68DD2 849 aa21.31■■□□□ 1
SSU72-204ENST00000378726 ABHD15Q6UXT9 468 aa21.31■■□□□ 1
SSU72-204ENST00000378726 CYFIP1Q7L576 1253 aa21.31■■□□□ 1
SSU72-204ENST00000378726 OTUD6AQ7L8S5 288 aa21.31■■□□□ 1
SSU72-204ENST00000378726 ATP6V0A1Q93050 837 aa21.31■■□□□ 1
SSU72-204ENST00000378726 MMRN2Q9H8L6 949 aa21.31■■□□□ 1
SSU72-204ENST00000378726 SIK3Q9Y2K2 1263 aa21.31■■□□□ 1
SSU72-204ENST00000378726 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.31■■□□□ 1
SSU72-204ENST00000378726 ZNF862O60290 1169 aa21.31■■□□□ 1
SSU72-204ENST00000378726 DKC1O60832 514 aaKnown RBP eCLIP21.31■■□□□ 1
SSU72-204ENST00000378726 EDNRBP24530 442 aa21.31■■□□□ 1
SSU72-204ENST00000378726 COPB2P35606 906 aa21.31■■□□□ 1
SSU72-204ENST00000378726 CYP26C1Q6V0L0 522 aa21.31■■□□□ 1
SSU72-204ENST00000378726 DNAJC7Q99615 494 aa21.31■■□□□ 1
SSU72-204ENST00000378726 IKZF4Q9H2S9 585 aa21.31■■□□□ 1
SSU72-204ENST00000378726 PGK2P07205 417 aa21.3■■□□□ 1
SSU72-204ENST00000378726 OAS2P29728 719 aaKnown RBP21.3■■□□□ 1
SSU72-204ENST00000378726 ERVK-24P63145 666 aa21.3■■□□□ 1
SSU72-204ENST00000378726 FRMD5Q7Z6J6 570 aa21.3■■□□□ 1
SSU72-204ENST00000378726 CCDC155Q8N6L0 562 aa21.3■■□□□ 1
SSU72-204ENST00000378726 ARFGAP3Q9NP61 516 aa21.3■■□□□ 1
SSU72-204ENST00000378726 KIAA1217Q5T5P2 1943 aa21.3■■□□□ 1
SSU72-204ENST00000378726 CYP2C8P10632 490 aa21.29■■□□□ 1
SSU72-204ENST00000378726 SMC1AQ14683 1233 aaKnown RBP21.29■■□□□ 1
SSU72-204ENST00000378726 MIS18BP1Q6P0N0 1132 aa21.29■■□□□ 1
SSU72-204ENST00000378726 SMCR8Q8TEV9 937 aaPredicted RBP21.29■■□□□ 1
SSU72-204ENST00000378726 TIPINQ9BVW5 301 aa21.29■■□□□ 1
SSU72-204ENST00000378726 STRA6Q9BX79 667 aa21.29■■□□□ 1
SSU72-204ENST00000378726 ARMCX3Q9UH62 379 aaPredicted RBP21.29■■□□□ 1
SSU72-204ENST00000378726 FAM184BQ9ULE4 1060 aa21.29■■□□□ 1
SSU72-204ENST00000378726 UBE4BO95155 1302 aa21.29■■□□□ 1
SSU72-204ENST00000378726 PLS3P13797 630 aa21.29■■□□□ 1
SSU72-204ENST00000378726 ZBED6P86452 979 aa21.29■■□□□ 1
SSU72-204ENST00000378726 KCTD2Q14681 263 aa21.29■■□□□ 1
SSU72-204ENST00000378726 WDR78Q5VTH9 848 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms